Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPB3Q92617 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPB3Q92617 AC141586.5-201ENST00000624546 2050 ntBASIC14.19□□□□□ -0.14
NPIPB3Q92617 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPB3Q92617 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPB3Q92617 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.19□□□□□ -0.14
NPIPB3Q92617 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.19□□□□□ -0.14
NPIPB3Q92617 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
NPIPB3Q92617 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPB3Q92617 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPB3Q92617 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
NPIPB3Q92617 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.19□□□□□ -0.14
NPIPB3Q92617 PRORSD1P-202ENST00000563365 2154 ntBASIC14.19□□□□□ -0.14
NPIPB3Q92617 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPB3Q92617 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.19□□□□□ -0.14
NPIPB3Q92617 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPB3Q92617 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPB3Q92617 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPB3Q92617 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.19□□□□□ -0.14
NPIPB3Q92617 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPB3Q92617 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.19□□□□□ -0.14
NPIPB3Q92617 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPB3Q92617 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPB3Q92617 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPB3Q92617 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPB3Q92617 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
NPIPB3Q92617 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
NPIPB3Q92617 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPB3Q92617 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
NPIPB3Q92617 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.19□□□□□ -0.14
NPIPB3Q92617 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.19□□□□□ -0.14
NPIPB3Q92617 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.19□□□□□ -0.14
NPIPB3Q92617 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.19□□□□□ -0.14
NPIPB3Q92617 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.19□□□□□ -0.14
NPIPB3Q92617 AP000525.1-201ENST00000608286 694 ntBASIC14.19□□□□□ -0.14
NPIPB3Q92617 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
NPIPB3Q92617 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.19□□□□□ -0.14
NPIPB3Q92617 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPB3Q92617 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.19□□□□□ -0.14
NPIPB3Q92617 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.19□□□□□ -0.14
NPIPB3Q92617 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPB3Q92617 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPB3Q92617 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NPIPB3Q92617 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPB3Q92617 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NPIPB3Q92617 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.19□□□□□ -0.14
NPIPB3Q92617 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPB3Q92617 AC108860.2-201ENST00000562760 2183 ntBASIC14.19□□□□□ -0.14
NPIPB3Q92617 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NPIPB3Q92617 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPB3Q92617 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPB3Q92617 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NPIPB3Q92617 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPB3Q92617 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPB3Q92617 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
NPIPB3Q92617 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPB3Q92617 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NPIPB3Q92617 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.18□□□□□ -0.14
NPIPB3Q92617 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPB3Q92617 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPB3Q92617 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPB3Q92617 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.18□□□□□ -0.14
NPIPB3Q92617 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPB3Q92617 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
NPIPB3Q92617 AC007663.1-201ENST00000438948 1240 ntBASIC14.18□□□□□ -0.14
NPIPB3Q92617 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.18□□□□□ -0.14
NPIPB3Q92617 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.18□□□□□ -0.14
NPIPB3Q92617 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.18□□□□□ -0.14
NPIPB3Q92617 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPB3Q92617 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NPIPB3Q92617 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPB3Q92617 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPB3Q92617 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPB3Q92617 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPB3Q92617 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPB3Q92617 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NPIPB3Q92617 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NPIPB3Q92617 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPB3Q92617 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB3Q92617 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NPIPB3Q92617 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB3Q92617 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB3Q92617 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB3Q92617 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.17□□□□□ -0.14
NPIPB3Q92617 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPB3Q92617 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB3Q92617 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NPIPB3Q92617 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPB3Q92617 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB3Q92617 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB3Q92617 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.17□□□□□ -0.14
NPIPB3Q92617 MIR1238-201ENST00000408483 83 ntBASIC14.17□□□□□ -0.14
NPIPB3Q92617 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB3Q92617 AL390955.1-201ENST00000428694 934 ntBASIC14.17□□□□□ -0.14
NPIPB3Q92617 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPB3Q92617 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.17□□□□□ -0.14
NPIPB3Q92617 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.17□□□□□ -0.14
NPIPB3Q92617 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPB3Q92617 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.17□□□□□ -0.14
NPIPB3Q92617 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms