Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3RF3Q8TEJ3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.26■□□□□ 0.99
SH3RF3Q8TEJ3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3RF3Q8TEJ3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3RF3Q8TEJ3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3RF3Q8TEJ3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SH3RF3Q8TEJ3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.26■□□□□ 0.99
SH3RF3Q8TEJ3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3RF3Q8TEJ3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3RF3Q8TEJ3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC21.26■□□□□ 0.99
SH3RF3Q8TEJ3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3RF3Q8TEJ3 AF228730.7-201ENST00000641842 219 ntBASIC21.26■□□□□ 0.99
SH3RF3Q8TEJ3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.26■□□□□ 0.99
SH3RF3Q8TEJ3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SH3RF3Q8TEJ3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3RF3Q8TEJ3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SH3RF3Q8TEJ3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SH3RF3Q8TEJ3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3RF3Q8TEJ3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 AC104581.1-202ENST00000635932 2618 ntBASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 REXO1L9P-201ENST00000604264 2108 ntBASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 RPS2P1-201ENST00000434010 821 ntBASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 NKAPP1-205ENST00000585790 367 ntBASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF3Q8TEJ3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 AC025062.2-201ENST00000605477 670 ntBASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF3Q8TEJ3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SH3RF3Q8TEJ3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SH3RF3Q8TEJ3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SH3RF3Q8TEJ3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.23■□□□□ 0.99
SH3RF3Q8TEJ3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SH3RF3Q8TEJ3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.23■□□□□ 0.99
SH3RF3Q8TEJ3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SH3RF3Q8TEJ3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.23■□□□□ 0.99
SH3RF3Q8TEJ3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SH3RF3Q8TEJ3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SH3RF3Q8TEJ3 AC122714.2-201ENST00000502787 707 ntBASIC21.23■□□□□ 0.99
SH3RF3Q8TEJ3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.23■□□□□ 0.99
SH3RF3Q8TEJ3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC21.23■□□□□ 0.99
SH3RF3Q8TEJ3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.23■□□□□ 0.99
SH3RF3Q8TEJ3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.23■□□□□ 0.99
SH3RF3Q8TEJ3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.23■□□□□ 0.99
SH3RF3Q8TEJ3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.23■□□□□ 0.99
SH3RF3Q8TEJ3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
SH3RF3Q8TEJ3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.23■□□□□ 0.99
SH3RF3Q8TEJ3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.23■□□□□ 0.99
SH3RF3Q8TEJ3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF3Q8TEJ3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms