Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC005332.1-201ENST00000577698 1310 ntBASIC19.24■□□□□ 0.67
LMO3Q8TAP4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LMO3Q8TAP4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LMO3Q8TAP4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 TSPY22P-201ENST00000427496 604 ntBASIC19.23■□□□□ 0.67
LMO3Q8TAP4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMO3Q8TAP4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 AC133963.1-201ENST00000504166 1679 ntBASIC19.22■□□□□ 0.67
LMO3Q8TAP4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.22■□□□□ 0.67
LMO3Q8TAP4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LMO3Q8TAP4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.21■□□□□ 0.67
LMO3Q8TAP4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.21■□□□□ 0.67
LMO3Q8TAP4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LMO3Q8TAP4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.21■□□□□ 0.67
LMO3Q8TAP4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LMO3Q8TAP4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.21■□□□□ 0.67
LMO3Q8TAP4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LMO3Q8TAP4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.21■□□□□ 0.67
LMO3Q8TAP4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.21■□□□□ 0.67
LMO3Q8TAP4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LMO3Q8TAP4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LMO3Q8TAP4 AC116407.2-201ENST00000613639 860 ntBASIC19.21■□□□□ 0.67
LMO3Q8TAP4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LMO3Q8TAP4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LMO3Q8TAP4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LMO3Q8TAP4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.21■□□□□ 0.67
LMO3Q8TAP4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LMO3Q8TAP4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
LMO3Q8TAP4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMO3Q8TAP4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMO3Q8TAP4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LMO3Q8TAP4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMO3Q8TAP4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
LMO3Q8TAP4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.2■□□□□ 0.66
LMO3Q8TAP4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMO3Q8TAP4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMO3Q8TAP4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.2■□□□□ 0.66
LMO3Q8TAP4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMO3Q8TAP4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMO3Q8TAP4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.2■□□□□ 0.66
LMO3Q8TAP4 AC096633.1-201ENST00000422446 749 ntBASIC19.2■□□□□ 0.66
LMO3Q8TAP4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LMO3Q8TAP4 AC116407.4-201ENST00000623319 1061 ntBASIC19.2■□□□□ 0.66
LMO3Q8TAP4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.2■□□□□ 0.66
LMO3Q8TAP4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMO3Q8TAP4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMO3Q8TAP4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 AC020763.4-201ENST00000623414 4170 ntBASIC19.19■□□□□ 0.66
LMO3Q8TAP4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms