Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 AC093503.3-201ENST00000624917 2352 ntBASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 BX323043.1-201ENST00000641006 1765 ntBASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 TNXA-203ENST00000507684 2038 ntBASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CNEP1R1Q8N9A8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 AC005336.2-201ENST00000593183 939 ntBASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 AL031008.1-201ENST00000619963 541 ntBASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNEP1R1Q8N9A8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNEP1R1Q8N9A8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNEP1R1Q8N9A8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.92■□□□□ 0.14
CNEP1R1Q8N9A8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.92■□□□□ 0.14
CNEP1R1Q8N9A8 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNEP1R1Q8N9A8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CNEP1R1Q8N9A8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNEP1R1Q8N9A8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNEP1R1Q8N9A8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.92■□□□□ 0.14
CNEP1R1Q8N9A8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CNEP1R1Q8N9A8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNEP1R1Q8N9A8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms