Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 RCN1P2-201ENST00000398357 915 ntBASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 AC138894.3-201ENST00000603787 634 ntBASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 AC010460.3-201ENST00000511359 1579 ntBASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.93■□□□□ 0.3
ARHGEF39Q8N4T4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 INTS4P1-201ENST00000438455 1935 ntBASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 AC007967.3-201ENST00000434308 558 ntBASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 KRT16P4-201ENST00000453883 522 ntBASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 AL121772.3-201ENST00000610840 674 ntBASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARHGEF39Q8N4T4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 AC096582.2-201ENST00000510860 516 ntBASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 MIR5100-201ENST00000579544 119 ntBASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.91■□□□□ 0.3
ARHGEF39Q8N4T4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms