Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
XRN1Q8IZH2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 AP002414.1-201ENST00000391405 1147 ntBASIC24.75■■□□□ 1.55
XRN1Q8IZH2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 COX5BP2-201ENST00000392354 334 ntBASIC24.75■■□□□ 1.55
XRN1Q8IZH2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 AC022145.2-201ENST00000598203 171 ntBASIC24.75■■□□□ 1.55
XRN1Q8IZH2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
XRN1Q8IZH2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC24.74■■□□□ 1.55
XRN1Q8IZH2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC24.74■■□□□ 1.55
XRN1Q8IZH2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
XRN1Q8IZH2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
XRN1Q8IZH2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
XRN1Q8IZH2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
XRN1Q8IZH2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC24.74■■□□□ 1.55
XRN1Q8IZH2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
XRN1Q8IZH2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
XRN1Q8IZH2 AC023141.5-201ENST00000458585 616 ntBASIC24.74■■□□□ 1.55
XRN1Q8IZH2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC24.74■■□□□ 1.55
XRN1Q8IZH2 BCAR1-209ENST00000546196 1340 ntBASIC24.74■■□□□ 1.55
XRN1Q8IZH2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
XRN1Q8IZH2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC24.74■■□□□ 1.55
XRN1Q8IZH2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC24.73■■□□□ 1.55
XRN1Q8IZH2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
XRN1Q8IZH2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC24.73■■□□□ 1.55
XRN1Q8IZH2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
XRN1Q8IZH2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
XRN1Q8IZH2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
XRN1Q8IZH2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
XRN1Q8IZH2 AC004461.1-201ENST00000412461 403 ntBASIC24.73■■□□□ 1.55
XRN1Q8IZH2 ACTG1P14-201ENST00000446382 1122 ntBASIC24.73■■□□□ 1.55
XRN1Q8IZH2 AC109322.1-201ENST00000524499 1264 ntBASIC24.73■■□□□ 1.55
XRN1Q8IZH2 AC096734.2-201ENST00000562054 433 ntBASIC24.73■■□□□ 1.55
XRN1Q8IZH2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
XRN1Q8IZH2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
XRN1Q8IZH2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
XRN1Q8IZH2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
XRN1Q8IZH2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
XRN1Q8IZH2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
XRN1Q8IZH2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
XRN1Q8IZH2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
XRN1Q8IZH2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC24.73■■□□□ 1.55
XRN1Q8IZH2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC24.73■■□□□ 1.55
XRN1Q8IZH2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
XRN1Q8IZH2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
XRN1Q8IZH2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
XRN1Q8IZH2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC24.72■■□□□ 1.55
XRN1Q8IZH2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
XRN1Q8IZH2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
XRN1Q8IZH2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
XRN1Q8IZH2 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC24.72■■□□□ 1.55
XRN1Q8IZH2 AC239800.4-201ENST00000603712 296 ntBASIC24.72■■□□□ 1.55
XRN1Q8IZH2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
XRN1Q8IZH2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
XRN1Q8IZH2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
XRN1Q8IZH2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
XRN1Q8IZH2 CCDC74BP1-201ENST00000508880 1123 ntBASIC24.72■■□□□ 1.55
XRN1Q8IZH2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC24.72■■□□□ 1.55
XRN1Q8IZH2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC24.72■■□□□ 1.55
XRN1Q8IZH2 AC009093.7-201ENST00000623853 1223 ntBASIC24.72■■□□□ 1.55
XRN1Q8IZH2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
XRN1Q8IZH2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
XRN1Q8IZH2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
XRN1Q8IZH2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
XRN1Q8IZH2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC24.71■■□□□ 1.55
XRN1Q8IZH2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
XRN1Q8IZH2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
XRN1Q8IZH2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
XRN1Q8IZH2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
XRN1Q8IZH2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC24.71■■□□□ 1.55
XRN1Q8IZH2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC24.71■■□□□ 1.55
XRN1Q8IZH2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC24.71■■□□□ 1.55
XRN1Q8IZH2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC24.71■■□□□ 1.55
XRN1Q8IZH2 AL353135.1-201ENST00000606729 504 ntBASIC24.71■■□□□ 1.55
XRN1Q8IZH2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
XRN1Q8IZH2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC24.71■■□□□ 1.55
XRN1Q8IZH2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC24.7■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms