Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCXQ7RTU7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCXQ7RTU7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCXQ7RTU7 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SCXQ7RTU7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCXQ7RTU7 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCXQ7RTU7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCXQ7RTU7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SCXQ7RTU7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCXQ7RTU7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCXQ7RTU7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SCXQ7RTU7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCXQ7RTU7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC11.91□□□□□ -0.5
SCXQ7RTU7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC11.9□□□□□ -0.5
SCXQ7RTU7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC11.9□□□□□ -0.5
SCXQ7RTU7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC11.9□□□□□ -0.5
SCXQ7RTU7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 CROCCP3-202ENST00000420820 1947 ntBASIC11.9□□□□□ -0.5
SCXQ7RTU7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
SCXQ7RTU7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC11.9□□□□□ -0.5
SCXQ7RTU7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC11.9□□□□□ -0.5
SCXQ7RTU7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
SCXQ7RTU7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC11.9□□□□□ -0.5
SCXQ7RTU7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC11.9□□□□□ -0.5
SCXQ7RTU7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC11.9□□□□□ -0.5
SCXQ7RTU7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC11.9□□□□□ -0.5
SCXQ7RTU7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC11.9□□□□□ -0.5
SCXQ7RTU7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC11.9□□□□□ -0.5
SCXQ7RTU7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 AC007326.2-201ENST00000624224 7579 ntBASIC11.9□□□□□ -0.5
SCXQ7RTU7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
SCXQ7RTU7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SCXQ7RTU7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
SCXQ7RTU7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
SCXQ7RTU7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
SCXQ7RTU7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC11.9□□□□□ -0.51
SCXQ7RTU7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
SCXQ7RTU7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC11.89□□□□□ -0.51
SCXQ7RTU7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
SCXQ7RTU7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC11.89□□□□□ -0.51
SCXQ7RTU7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC11.89□□□□□ -0.51
SCXQ7RTU7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC11.89□□□□□ -0.51
SCXQ7RTU7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
SCXQ7RTU7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 HBZP1-201ENST00000354915 429 ntBASIC11.89□□□□□ -0.51
SCXQ7RTU7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 AL645929.1-201ENST00000420084 975 ntBASIC11.89□□□□□ -0.51
SCXQ7RTU7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC11.89□□□□□ -0.51
SCXQ7RTU7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC11.89□□□□□ -0.51
SCXQ7RTU7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC11.89□□□□□ -0.51
SCXQ7RTU7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC11.89□□□□□ -0.51
SCXQ7RTU7 KRT126P-201ENST00000549467 1181 ntBASIC11.89□□□□□ -0.51
SCXQ7RTU7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC11.89□□□□□ -0.51
SCXQ7RTU7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
SCXQ7RTU7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC11.89□□□□□ -0.51
SCXQ7RTU7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC11.89□□□□□ -0.51
SCXQ7RTU7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCXQ7RTU7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms