Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TTC39AQ5SRH9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.83■■□□□ 1.09
TTC39AQ5SRH9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
TTC39AQ5SRH9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TTC39AQ5SRH9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TTC39AQ5SRH9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
TTC39AQ5SRH9 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TTC39AQ5SRH9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TTC39AQ5SRH9 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.83■■□□□ 1.09
TTC39AQ5SRH9 KRT16P4-201ENST00000453883 522 ntBASIC21.83■■□□□ 1.09
TTC39AQ5SRH9 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.83■■□□□ 1.09
TTC39AQ5SRH9 AC009533.2-201ENST00000543664 586 ntBASIC21.83■■□□□ 1.09
TTC39AQ5SRH9 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.83■■□□□ 1.09
TTC39AQ5SRH9 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.83■■□□□ 1.09
TTC39AQ5SRH9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.83■■□□□ 1.09
TTC39AQ5SRH9 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.83■■□□□ 1.09
TTC39AQ5SRH9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TTC39AQ5SRH9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
TTC39AQ5SRH9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TTC39AQ5SRH9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TTC39AQ5SRH9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TTC39AQ5SRH9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TTC39AQ5SRH9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.83■■□□□ 1.08
TTC39AQ5SRH9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TTC39AQ5SRH9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
TTC39AQ5SRH9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.83■■□□□ 1.08
TTC39AQ5SRH9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TTC39AQ5SRH9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 LINC01711-201ENST00000598340 967 ntBASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 AC114341.1-201ENST00000618070 349 ntBASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
TTC39AQ5SRH9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 BICD1-207ENST00000551848 1962 ntBASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 AP000997.3-201ENST00000623333 2250 ntBASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 RCN1P2-201ENST00000398357 915 ntBASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 RN7SL510P-201ENST00000581311 263 ntBASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TTC39AQ5SRH9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms