Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 CROCCP1-201ENST00000426910 5675 ntBASIC17.5■□□□□ 0.39
SGO1Q5FBB7 KRT18P22-201ENST00000402024 1347 ntBASIC17.5■□□□□ 0.39
SGO1Q5FBB7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 AC092865.7-201ENST00000641832 219 ntBASIC17.5■□□□□ 0.39
SGO1Q5FBB7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.5■□□□□ 0.39
SGO1Q5FBB7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.49■□□□□ 0.39
SGO1Q5FBB7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 AC087499.1-201ENST00000418141 1075 ntBASIC17.49■□□□□ 0.39
SGO1Q5FBB7 ECEL1P3-201ENST00000427961 737 ntBASIC17.49■□□□□ 0.39
SGO1Q5FBB7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 AL157888.1-201ENST00000631930 593 ntBASIC17.49■□□□□ 0.39
SGO1Q5FBB7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SGO1Q5FBB7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SGO1Q5FBB7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SGO1Q5FBB7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SGO1Q5FBB7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SGO1Q5FBB7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SGO1Q5FBB7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SGO1Q5FBB7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SGO1Q5FBB7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SGO1Q5FBB7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.48■□□□□ 0.39
SGO1Q5FBB7 MIR3917-201ENST00000580971 93 ntBASIC17.48■□□□□ 0.39
SGO1Q5FBB7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.48■□□□□ 0.39
SGO1Q5FBB7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.48■□□□□ 0.39
SGO1Q5FBB7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
SGO1Q5FBB7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SGO1Q5FBB7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.48■□□□□ 0.39
SGO1Q5FBB7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SGO1Q5FBB7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SGO1Q5FBB7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SGO1Q5FBB7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.48■□□□□ 0.39
SGO1Q5FBB7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SGO1Q5FBB7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SGO1Q5FBB7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SGO1Q5FBB7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms