Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KHDC1Q4VXA5 AL671277.2-201ENST00000458060 996 ntBASIC18.22■□□□□ 0.51
KHDC1Q4VXA5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.22■□□□□ 0.51
KHDC1Q4VXA5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.22■□□□□ 0.51
KHDC1Q4VXA5 LINC01238-205ENST00000567549 1107 ntBASIC18.22■□□□□ 0.51
KHDC1Q4VXA5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.22■□□□□ 0.51
KHDC1Q4VXA5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.22■□□□□ 0.51
KHDC1Q4VXA5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KHDC1Q4VXA5 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KHDC1Q4VXA5 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
KHDC1Q4VXA5 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.22■□□□□ 0.51
KHDC1Q4VXA5 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
KHDC1Q4VXA5 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KHDC1Q4VXA5 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
KHDC1Q4VXA5 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.22■□□□□ 0.51
KHDC1Q4VXA5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.22■□□□□ 0.51
KHDC1Q4VXA5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KHDC1Q4VXA5 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KHDC1Q4VXA5 AC138932.1-201ENST00000534164 6830 ntBASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 HBZP1-201ENST00000354915 429 ntBASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 MIR3180-4-201ENST00000582223 153 ntBASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 SDHAP2-201ENST00000455183 2001 ntBASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KHDC1Q4VXA5 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 ARMC10P1-201ENST00000313754 855 ntBASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 VENTXP5-201ENST00000523979 775 ntBASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 AC087388.1-201ENST00000571370 1112 ntBASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KHDC1Q4VXA5 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 AL391807.1-203ENST00000604392 2365 ntBASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 LINC01311-201ENST00000565162 1445 ntBASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KHDC1Q4VXA5 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms