Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 UBALD1-205ENST00000590891 2641 ntBASIC16.11■□□□□ 0.17
CCDC58Q4VC31 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 AL023284.2-201ENST00000405850 579 ntBASIC16.11■□□□□ 0.17
CCDC58Q4VC31 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 AC008040.2-201ENST00000461049 708 ntBASIC16.11■□□□□ 0.17
CCDC58Q4VC31 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 AC008622.2-201ENST00000617006 1229 ntBASIC16.11■□□□□ 0.17
CCDC58Q4VC31 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC58Q4VC31 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 AC009102.3-201ENST00000623118 1491 ntBASIC16.1■□□□□ 0.17
CCDC58Q4VC31 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 MIR149-201ENST00000384879 89 ntBASIC16.1■□□□□ 0.17
CCDC58Q4VC31 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 SDHAP2-201ENST00000455183 2001 ntBASIC16.1■□□□□ 0.17
CCDC58Q4VC31 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 CROCCP1-201ENST00000426910 5675 ntBASIC16.1■□□□□ 0.17
CCDC58Q4VC31 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC58Q4VC31 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC58Q4VC31 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC58Q4VC31 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.09■□□□□ 0.17
CCDC58Q4VC31 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC58Q4VC31 AL163051.1-201ENST00000569214 1512 ntBASIC16.09■□□□□ 0.17
CCDC58Q4VC31 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
CCDC58Q4VC31 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC58Q4VC31 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC58Q4VC31 AC093010.1-201ENST00000473625 1624 ntBASIC16.09■□□□□ 0.17
CCDC58Q4VC31 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.09■□□□□ 0.17
CCDC58Q4VC31 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC58Q4VC31 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC58Q4VC31 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CCDC58Q4VC31 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC58Q4VC31 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC58Q4VC31 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC58Q4VC31 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.09■□□□□ 0.17
CCDC58Q4VC31 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC58Q4VC31 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC58Q4VC31 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms