Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP4BP1P59074 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP4BP1P59074 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.54■□□□□ 0.88
CHMP4BP1P59074 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.54■□□□□ 0.88
CHMP4BP1P59074 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.54■□□□□ 0.88
CHMP4BP1P59074 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.54■□□□□ 0.88
CHMP4BP1P59074 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP4BP1P59074 NUS1P2-201ENST00000417358 873 ntBASIC20.54■□□□□ 0.88
CHMP4BP1P59074 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.54■□□□□ 0.88
CHMP4BP1P59074 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.54■□□□□ 0.88
CHMP4BP1P59074 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.54■□□□□ 0.88
CHMP4BP1P59074 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.54■□□□□ 0.88
CHMP4BP1P59074 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP4BP1P59074 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP4BP1P59074 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.54■□□□□ 0.88
CHMP4BP1P59074 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP4BP1P59074 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP4BP1P59074 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.54■□□□□ 0.88
CHMP4BP1P59074 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP4BP1P59074 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CHMP4BP1P59074 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP4BP1P59074 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CHMP4BP1P59074 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.53■□□□□ 0.88
CHMP4BP1P59074 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.53■□□□□ 0.88
CHMP4BP1P59074 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP4BP1P59074 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP4BP1P59074 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CHMP4BP1P59074 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP4BP1P59074 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.52■□□□□ 0.88
CHMP4BP1P59074 AL353692.3-201ENST00000407031 1396 ntBASIC20.52■□□□□ 0.88
CHMP4BP1P59074 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CHMP4BP1P59074 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP4BP1P59074 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP4BP1P59074 MINOS1P3-201ENST00000457048 203 ntBASIC20.52■□□□□ 0.88
CHMP4BP1P59074 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.52■□□□□ 0.88
CHMP4BP1P59074 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP4BP1P59074 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CHMP4BP1P59074 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP4BP1P59074 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP4BP1P59074 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.52■□□□□ 0.88
CHMP4BP1P59074 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHMP4BP1P59074 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHMP4BP1P59074 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.51■□□□□ 0.87
CHMP4BP1P59074 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP4BP1P59074 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CHMP4BP1P59074 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.51■□□□□ 0.87
CHMP4BP1P59074 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.51■□□□□ 0.87
CHMP4BP1P59074 AL160237.2-201ENST00000556165 472 ntBASIC20.51■□□□□ 0.87
CHMP4BP1P59074 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.51■□□□□ 0.87
CHMP4BP1P59074 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.51■□□□□ 0.87
CHMP4BP1P59074 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.51■□□□□ 0.87
CHMP4BP1P59074 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CHMP4BP1P59074 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP4BP1P59074 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
CHMP4BP1P59074 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.51■□□□□ 0.87
CHMP4BP1P59074 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP4BP1P59074 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP4BP1P59074 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP4BP1P59074 KRT8P50-201ENST00000562022 1438 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms