Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH12P55289 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH12P55289 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH12P55289 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH12P55289 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
CDH12P55289 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH12P55289 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH12P55289 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH12P55289 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH12P55289 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH12P55289 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH12P55289 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
CDH12P55289 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH12P55289 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH12P55289 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH12P55289 KRT17P2-201ENST00000300992 1314 ntBASIC16.77■□□□□ 0.28
CDH12P55289 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH12P55289 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH12P55289 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH12P55289 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH12P55289 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH12P55289 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CDH12P55289 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CDH12P55289 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH12P55289 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH12P55289 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.77■□□□□ 0.28
CDH12P55289 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH12P55289 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH12P55289 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH12P55289 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH12P55289 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH12P55289 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH12P55289 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH12P55289 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH12P55289 KRT8P7-201ENST00000533003 1432 ntBASIC16.77■□□□□ 0.27
CDH12P55289 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH12P55289 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.77■□□□□ 0.27
CDH12P55289 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH12P55289 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
CDH12P55289 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH12P55289 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.77■□□□□ 0.27
CDH12P55289 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.77■□□□□ 0.27
CDH12P55289 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH12P55289 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH12P55289 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH12P55289 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH12P55289 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH12P55289 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH12P55289 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH12P55289 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CDH12P55289 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH12P55289 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH12P55289 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH12P55289 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH12P55289 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CDH12P55289 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.76■□□□□ 0.27
CDH12P55289 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.76■□□□□ 0.27
CDH12P55289 C2orf69P3-201ENST00000565542 1120 ntBASIC16.76■□□□□ 0.27
CDH12P55289 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CDH12P55289 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.76■□□□□ 0.27
CDH12P55289 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CDH12P55289 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH12P55289 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH12P55289 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH12P55289 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH12P55289 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH12P55289 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH12P55289 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH12P55289 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH12P55289 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH12P55289 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH12P55289 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH12P55289 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDH12P55289 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH12P55289 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH12P55289 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH12P55289 LINC01126-201ENST00000623515 1646 ntBASIC16.75■□□□□ 0.27
CDH12P55289 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH12P55289 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH12P55289 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CDH12P55289 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH12P55289 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH12P55289 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH12P55289 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.75■□□□□ 0.27
CDH12P55289 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH12P55289 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
CDH12P55289 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CDH12P55289 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH12P55289 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH12P55289 OR6D1P-203ENST00000641209 4860 ntBASIC16.75■□□□□ 0.27
CDH12P55289 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH12P55289 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH12P55289 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH12P55289 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH12P55289 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH12P55289 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH12P55289 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH12P55289 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH12P55289 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH12P55289 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms