Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 Z69720.1-201ENST00000601483 472 ntBASIC19.03■□□□□ 0.64
CACNA2D1P54289 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.03■□□□□ 0.64
CACNA2D1P54289 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.03■□□□□ 0.64
CACNA2D1P54289 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CACNA2D1P54289 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CACNA2D1P54289 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.03■□□□□ 0.64
CACNA2D1P54289 AL133373.2-201ENST00000623187 2828 ntBASIC19.03■□□□□ 0.64
CACNA2D1P54289 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
CACNA2D1P54289 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CACNA2D1P54289 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
CACNA2D1P54289 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CACNA2D1P54289 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.03■□□□□ 0.64
CACNA2D1P54289 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.03■□□□□ 0.64
CACNA2D1P54289 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.03■□□□□ 0.64
CACNA2D1P54289 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CACNA2D1P54289 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.02■□□□□ 0.64
CACNA2D1P54289 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CACNA2D1P54289 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.02■□□□□ 0.64
CACNA2D1P54289 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.02■□□□□ 0.64
CACNA2D1P54289 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CACNA2D1P54289 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.02■□□□□ 0.64
CACNA2D1P54289 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CACNA2D1P54289 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CACNA2D1P54289 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CACNA2D1P54289 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CACNA2D1P54289 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
CACNA2D1P54289 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CACNA2D1P54289 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.02■□□□□ 0.64
CACNA2D1P54289 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CACNA2D1P54289 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CACNA2D1P54289 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CACNA2D1P54289 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.02■□□□□ 0.64
CACNA2D1P54289 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.02■□□□□ 0.64
CACNA2D1P54289 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.02■□□□□ 0.64
CACNA2D1P54289 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.02■□□□□ 0.64
CACNA2D1P54289 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.02■□□□□ 0.64
CACNA2D1P54289 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CACNA2D1P54289 AC099336.1-202ENST00000602961 463 ntBASIC19.02■□□□□ 0.64
CACNA2D1P54289 AC138894.3-201ENST00000603787 634 ntBASIC19.02■□□□□ 0.64
CACNA2D1P54289 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.02■□□□□ 0.64
CACNA2D1P54289 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CACNA2D1P54289 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.02■□□□□ 0.64
CACNA2D1P54289 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CACNA2D1P54289 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CACNA2D1P54289 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CACNA2D1P54289 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CACNA2D1P54289 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.02■□□□□ 0.63
CACNA2D1P54289 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.02■□□□□ 0.63
CACNA2D1P54289 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.02■□□□□ 0.63
CACNA2D1P54289 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CACNA2D1P54289 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA2D1P54289 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA2D1P54289 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CACNA2D1P54289 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA2D1P54289 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CACNA2D1P54289 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.01■□□□□ 0.63
CACNA2D1P54289 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA2D1P54289 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA2D1P54289 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA2D1P54289 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA2D1P54289 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA2D1P54289 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA2D1P54289 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CACNA2D1P54289 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA2D1P54289 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA2D1P54289 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA2D1P54289 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.01■□□□□ 0.63
CACNA2D1P54289 TSPY19P-201ENST00000418461 509 ntBASIC19.01■□□□□ 0.63
CACNA2D1P54289 AC246785.2-201ENST00000432512 513 ntBASIC19.01■□□□□ 0.63
CACNA2D1P54289 TSPY18P-201ENST00000441642 509 ntBASIC19.01■□□□□ 0.63
CACNA2D1P54289 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.01■□□□□ 0.63
CACNA2D1P54289 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA2D1P54289 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.01■□□□□ 0.63
CACNA2D1P54289 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.01■□□□□ 0.63
CACNA2D1P54289 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.01■□□□□ 0.63
CACNA2D1P54289 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA2D1P54289 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA2D1P54289 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA2D1P54289 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA2D1P54289 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA2D1P54289 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA2D1P54289 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA2D1P54289 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA2D1P54289 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA2D1P54289 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19■□□□□ 0.63
CACNA2D1P54289 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19■□□□□ 0.63
CACNA2D1P54289 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA2D1P54289 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA2D1P54289 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19■□□□□ 0.63
CACNA2D1P54289 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA2D1P54289 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19■□□□□ 0.63
CACNA2D1P54289 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19■□□□□ 0.63
CACNA2D1P54289 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA2D1P54289 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CACNA2D1P54289 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA2D1P54289 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19■□□□□ 0.63
CACNA2D1P54289 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CACNA2D1P54289 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19■□□□□ 0.63
CACNA2D1P54289 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19■□□□□ 0.63
CACNA2D1P54289 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms