Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEK3P51956 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NEK3P51956 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEK3P51956 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NEK3P51956 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NEK3P51956 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NEK3P51956 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEK3P51956 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEK3P51956 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NEK3P51956 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.53■□□□□ 0.56
NEK3P51956 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.53■□□□□ 0.56
NEK3P51956 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
NEK3P51956 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NEK3P51956 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEK3P51956 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEK3P51956 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEK3P51956 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.53■□□□□ 0.56
NEK3P51956 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.53■□□□□ 0.56
NEK3P51956 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.53■□□□□ 0.56
NEK3P51956 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.53■□□□□ 0.56
NEK3P51956 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NEK3P51956 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEK3P51956 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NEK3P51956 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEK3P51956 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEK3P51956 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NEK3P51956 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
NEK3P51956 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEK3P51956 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.52■□□□□ 0.56
NEK3P51956 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.52■□□□□ 0.56
NEK3P51956 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
NEK3P51956 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.52■□□□□ 0.56
NEK3P51956 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.52■□□□□ 0.56
NEK3P51956 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.52■□□□□ 0.56
NEK3P51956 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.52■□□□□ 0.56
NEK3P51956 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEK3P51956 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
NEK3P51956 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NEK3P51956 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEK3P51956 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NEK3P51956 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NEK3P51956 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NEK3P51956 REXO1L9P-201ENST00000604264 2108 ntBASIC18.52■□□□□ 0.55
NEK3P51956 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NEK3P51956 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NEK3P51956 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.52■□□□□ 0.55
NEK3P51956 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NEK3P51956 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK3P51956 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NEK3P51956 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK3P51956 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK3P51956 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK3P51956 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
NEK3P51956 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NEK3P51956 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
NEK3P51956 BX276092.5-203ENST00000456199 560 ntBASIC18.51■□□□□ 0.55
NEK3P51956 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.51■□□□□ 0.55
NEK3P51956 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.51■□□□□ 0.55
NEK3P51956 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.51■□□□□ 0.55
NEK3P51956 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
NEK3P51956 AL121672.3-201ENST00000608644 468 ntBASIC18.51■□□□□ 0.55
NEK3P51956 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
NEK3P51956 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK3P51956 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK3P51956 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK3P51956 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK3P51956 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NEK3P51956 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK3P51956 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
NEK3P51956 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.51■□□□□ 0.55
NEK3P51956 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NEK3P51956 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK3P51956 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NEK3P51956 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEK3P51956 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NEK3P51956 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.5■□□□□ 0.55
NEK3P51956 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEK3P51956 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEK3P51956 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEK3P51956 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.5■□□□□ 0.55
NEK3P51956 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEK3P51956 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.5■□□□□ 0.55
NEK3P51956 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.5■□□□□ 0.55
NEK3P51956 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEK3P51956 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEK3P51956 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEK3P51956 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NEK3P51956 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NEK3P51956 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEK3P51956 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEK3P51956 HCG4P8-203ENST00000443049 980 ntBASIC18.5■□□□□ 0.55
NEK3P51956 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.5■□□□□ 0.55
NEK3P51956 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.5■□□□□ 0.55
NEK3P51956 KRT18P56-201ENST00000507275 550 ntBASIC18.5■□□□□ 0.55
NEK3P51956 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.5■□□□□ 0.55
NEK3P51956 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.5■□□□□ 0.55
NEK3P51956 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.5■□□□□ 0.55
NEK3P51956 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEK3P51956 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
NEK3P51956 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms