Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
SOX6P35712 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX6P35712 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX6P35712 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
SOX6P35712 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SOX6P35712 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.18
SOX6P35712 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.14■□□□□ 0.17
SOX6P35712 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SOX6P35712 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
SOX6P35712 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SOX6P35712 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.14■□□□□ 0.17
SOX6P35712 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SOX6P35712 CROCCP2-202ENST00000412962 2773 ntBASIC16.14■□□□□ 0.17
SOX6P35712 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.14■□□□□ 0.17
SOX6P35712 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX6P35712 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX6P35712 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SOX6P35712 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
SOX6P35712 GUSBP6-202ENST00000438529 1198 ntBASIC16.14■□□□□ 0.17
SOX6P35712 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.14■□□□□ 0.17
SOX6P35712 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.14■□□□□ 0.17
SOX6P35712 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.14■□□□□ 0.17
SOX6P35712 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.14■□□□□ 0.17
SOX6P35712 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
SOX6P35712 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX6P35712 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX6P35712 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX6P35712 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SOX6P35712 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX6P35712 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SOX6P35712 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX6P35712 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.14■□□□□ 0.17
SOX6P35712 AC105020.1-201ENST00000435356 2205 ntBASIC16.14■□□□□ 0.17
SOX6P35712 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SOX6P35712 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SOX6P35712 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
SOX6P35712 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX6P35712 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.13■□□□□ 0.17
SOX6P35712 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SOX6P35712 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SOX6P35712 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SOX6P35712 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX6P35712 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.13■□□□□ 0.17
SOX6P35712 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SOX6P35712 AL355312.1-201ENST00000407115 2176 ntBASIC16.13■□□□□ 0.17
SOX6P35712 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.13■□□□□ 0.17
SOX6P35712 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX6P35712 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
SOX6P35712 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SOX6P35712 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX6P35712 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SOX6P35712 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.13■□□□□ 0.17
SOX6P35712 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SOX6P35712 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.13■□□□□ 0.17
SOX6P35712 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SOX6P35712 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.13■□□□□ 0.17
SOX6P35712 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.13■□□□□ 0.17
SOX6P35712 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.13■□□□□ 0.17
SOX6P35712 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.13■□□□□ 0.17
SOX6P35712 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SOX6P35712 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX6P35712 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX6P35712 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.13■□□□□ 0.17
SOX6P35712 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.13■□□□□ 0.17
SOX6P35712 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SOX6P35712 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.13■□□□□ 0.17
SOX6P35712 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.13■□□□□ 0.17
SOX6P35712 PCDHA14-201ENST00000506751 2298 ntBASIC16.13■□□□□ 0.17
SOX6P35712 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX6P35712 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX6P35712 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX6P35712 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SOX6P35712 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.13■□□□□ 0.17
SOX6P35712 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX6P35712 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX6P35712 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX6P35712 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SOX6P35712 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.13■□□□□ 0.17
SOX6P35712 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX6P35712 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.13■□□□□ 0.17
SOX6P35712 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX6P35712 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.12■□□□□ 0.17
SOX6P35712 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.12■□□□□ 0.17
SOX6P35712 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX6P35712 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.12■□□□□ 0.17
SOX6P35712 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX6P35712 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX6P35712 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
SOX6P35712 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SOX6P35712 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX6P35712 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX6P35712 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.12■□□□□ 0.17
SOX6P35712 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX6P35712 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX6P35712 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.12■□□□□ 0.17
SOX6P35712 AL355802.2-201ENST00000402069 882 ntBASIC16.12■□□□□ 0.17
SOX6P35712 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.12■□□□□ 0.17
SOX6P35712 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.12■□□□□ 0.17
SOX6P35712 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.12■□□□□ 0.17
SOX6P35712 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms