Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.98□□□□□ -0.17
RAB5AP20339 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB5AP20339 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB5AP20339 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB5AP20339 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
RAB5AP20339 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB5AP20339 AC131281.2-201ENST00000520478 145 ntBASIC13.98□□□□□ -0.17
RAB5AP20339 AC012414.1-201ENST00000556676 535 ntBASIC13.98□□□□□ -0.17
RAB5AP20339 DUX4L2-201ENST00000561772 1275 ntBASIC13.98□□□□□ -0.17
RAB5AP20339 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC13.98□□□□□ -0.17
RAB5AP20339 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB5AP20339 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
RAB5AP20339 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC13.98□□□□□ -0.17
RAB5AP20339 DUX4L6-201ENST00000626483 1275 ntBASIC13.98□□□□□ -0.17
RAB5AP20339 DUX4L1-201ENST00000627662 1275 ntBASIC13.98□□□□□ -0.17
RAB5AP20339 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC13.98□□□□□ -0.17
RAB5AP20339 DUX4L8-201ENST00000629013 1275 ntBASIC13.98□□□□□ -0.17
RAB5AP20339 DUX4L3-201ENST00000630187 1275 ntBASIC13.98□□□□□ -0.17
RAB5AP20339 DUX4L7-201ENST00000630678 1275 ntBASIC13.98□□□□□ -0.17
RAB5AP20339 DUX4L5-201ENST00000630834 1275 ntBASIC13.98□□□□□ -0.17
RAB5AP20339 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB5AP20339 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
RAB5AP20339 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
RAB5AP20339 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
RAB5AP20339 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
RAB5AP20339 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RAB5AP20339 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RAB5AP20339 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RAB5AP20339 AC112777.1-201ENST00000540175 1423 ntBASIC13.98□□□□□ -0.17
RAB5AP20339 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 AC007326.2-201ENST00000624224 7579 ntBASIC13.98□□□□□ -0.17
RAB5AP20339 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.97□□□□□ -0.17
RAB5AP20339 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RAB5AP20339 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5AP20339 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
RAB5AP20339 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC13.97□□□□□ -0.17
RAB5AP20339 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB5AP20339 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5AP20339 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5AP20339 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5AP20339 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RAB5AP20339 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RAB5AP20339 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RAB5AP20339 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5AP20339 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5AP20339 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5AP20339 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RAB5AP20339 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB5AP20339 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB5AP20339 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5AP20339 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5AP20339 NT5C3AP1-201ENST00000394500 1012 ntBASIC13.97□□□□□ -0.17
RAB5AP20339 AC243732.1-201ENST00000612648 864 ntBASIC13.97□□□□□ -0.17
RAB5AP20339 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC13.97□□□□□ -0.17
RAB5AP20339 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5AP20339 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB5AP20339 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
RAB5AP20339 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5AP20339 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5AP20339 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RAB5AP20339 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5AP20339 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB5AP20339 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RAB5AP20339 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5AP20339 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5AP20339 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAB5AP20339 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
RAB5AP20339 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
RAB5AP20339 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.96□□□□□ -0.17
RAB5AP20339 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB5AP20339 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB5AP20339 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC13.96□□□□□ -0.17
RAB5AP20339 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB5AP20339 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RAB5AP20339 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
RAB5AP20339 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB5AP20339 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RAB5AP20339 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms