Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM3P0C091 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.31■□□□□ 0.2
FREM3P0C091 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FREM3P0C091 TSPY19P-201ENST00000418461 509 ntBASIC16.31■□□□□ 0.2
FREM3P0C091 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.31■□□□□ 0.2
FREM3P0C091 TSPY18P-201ENST00000441642 509 ntBASIC16.31■□□□□ 0.2
FREM3P0C091 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.31■□□□□ 0.2
FREM3P0C091 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.31■□□□□ 0.2
FREM3P0C091 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.31■□□□□ 0.2
FREM3P0C091 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
FREM3P0C091 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.31■□□□□ 0.2
FREM3P0C091 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.31■□□□□ 0.2
FREM3P0C091 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
FREM3P0C091 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
FREM3P0C091 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM3P0C091 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FREM3P0C091 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FREM3P0C091 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM3P0C091 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.31■□□□□ 0.2
FREM3P0C091 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.31■□□□□ 0.2
FREM3P0C091 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.31■□□□□ 0.2
FREM3P0C091 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FREM3P0C091 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FREM3P0C091 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM3P0C091 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM3P0C091 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FREM3P0C091 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.3■□□□□ 0.2
FREM3P0C091 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM3P0C091 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM3P0C091 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.3■□□□□ 0.2
FREM3P0C091 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM3P0C091 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM3P0C091 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM3P0C091 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FREM3P0C091 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM3P0C091 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.3■□□□□ 0.2
FREM3P0C091 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FREM3P0C091 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.3■□□□□ 0.2
FREM3P0C091 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM3P0C091 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM3P0C091 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM3P0C091 AC067852.2-201ENST00000590513 2313 ntBASIC16.3■□□□□ 0.2
FREM3P0C091 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM3P0C091 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
FREM3P0C091 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.3■□□□□ 0.2
FREM3P0C091 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
FREM3P0C091 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM3P0C091 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.3■□□□□ 0.2
FREM3P0C091 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
FREM3P0C091 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
FREM3P0C091 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FREM3P0C091 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FREM3P0C091 AC112698.1-201ENST00000510299 916 ntBASIC16.3■□□□□ 0.2
FREM3P0C091 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.3■□□□□ 0.2
FREM3P0C091 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.3■□□□□ 0.2
FREM3P0C091 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.3■□□□□ 0.2
FREM3P0C091 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.3■□□□□ 0.2
FREM3P0C091 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM3P0C091 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
FREM3P0C091 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM3P0C091 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
FREM3P0C091 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM3P0C091 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.29■□□□□ 0.2
FREM3P0C091 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.29■□□□□ 0.2
FREM3P0C091 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
FREM3P0C091 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.29■□□□□ 0.2
FREM3P0C091 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.29■□□□□ 0.2
FREM3P0C091 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.29■□□□□ 0.2
FREM3P0C091 SLC25A6P4-201ENST00000586535 553 ntBASIC16.29■□□□□ 0.2
FREM3P0C091 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.29■□□□□ 0.2
FREM3P0C091 NOC2LP2-201ENST00000407594 1944 ntBASIC16.29■□□□□ 0.2
FREM3P0C091 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
FREM3P0C091 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FREM3P0C091 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM3P0C091 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM3P0C091 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM3P0C091 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms