Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.08■□□□□ 0
SIX6O95475 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.08■□□□□ 0
SIX6O95475 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.07■□□□□ 0
SIX6O95475 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.07■□□□□ 0
SIX6O95475 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.07■□□□□ 0
SIX6O95475 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
SIX6O95475 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SIX6O95475 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.07■□□□□ 0
SIX6O95475 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.07■□□□□ 0
SIX6O95475 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.07■□□□□ 0
SIX6O95475 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.07■□□□□ 0
SIX6O95475 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.07■□□□□ 0
SIX6O95475 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.07■□□□□ 0
SIX6O95475 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 HLA-A-209ENST00000638375 975 ntBASIC15.07■□□□□ 0
SIX6O95475 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.07■□□□□ 0
SIX6O95475 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.07■□□□□ 0
SIX6O95475 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
SIX6O95475 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.07■□□□□ 0
SIX6O95475 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 KRT8P3-201ENST00000519669 1449 ntBASIC15.07■□□□□ 0
SIX6O95475 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
SIX6O95475 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.07■□□□□ 0
SIX6O95475 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
SIX6O95475 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.07■□□□□ 0
SIX6O95475 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SIX6O95475 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SIX6O95475 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SIX6O95475 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIX6O95475 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SIX6O95475 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIX6O95475 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.06■□□□□ 0
SIX6O95475 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.06■□□□□ 0
SIX6O95475 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.06■□□□□ 0
SIX6O95475 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.06■□□□□ 0
SIX6O95475 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIX6O95475 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.06■□□□□ 0
SIX6O95475 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIX6O95475 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SIX6O95475 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIX6O95475 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIX6O95475 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.06■□□□□ 0
SIX6O95475 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.06■□□□□ 0
SIX6O95475 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIX6O95475 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.06■□□□□ 0
SIX6O95475 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SIX6O95475 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC15.06■□□□□ 0
SIX6O95475 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.06■□□□□ 0
SIX6O95475 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.06■□□□□ 0
SIX6O95475 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SIX6O95475 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SIX6O95475 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.06■□□□□ 0
SIX6O95475 AC092437.1-201ENST00000624794 1048 ntBASIC15.06■□□□□ 0
SIX6O95475 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SIX6O95475 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.06■□□□□ 0
SIX6O95475 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIX6O95475 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.06■□□□□ 0
SIX6O95475 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIX6O95475 RCC2P3-201ENST00000418112 1537 ntBASIC15.06■□□□□ 0
SIX6O95475 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.06■□□□□ 0
SIX6O95475 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.06■□□□□ 0
SIX6O95475 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SIX6O95475 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SIX6O95475 AC133963.1-201ENST00000504166 1679 ntBASIC15.06■□□□□ 0
SIX6O95475 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIX6O95475 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.06■□□□□ 0
SIX6O95475 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIX6O95475 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
SIX6O95475 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.05■□□□□ 0
SIX6O95475 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SIX6O95475 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.05■□□□□ 0
SIX6O95475 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.05■□□□□ 0
SIX6O95475 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.05■□□□□ 0
SIX6O95475 AL136379.1-201ENST00000623471 2642 ntBASIC15.05■□□□□ 0
SIX6O95475 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.05■□□□□ 0
SIX6O95475 PKD1P5-201ENST00000532415 10291 ntBASIC15.05■□□□□ -0
SIX6O95475 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.05■□□□□ -0
SIX6O95475 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SIX6O95475 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms