Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AC073195.1-201ENST00000607241 877 ntBASIC14.04□□□□□ -0.16
ZNF253O75346 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
ZNF253O75346 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF253O75346 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ZNF253O75346 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF253O75346 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF253O75346 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF253O75346 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF253O75346 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.04□□□□□ -0.16
ZNF253O75346 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF253O75346 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF253O75346 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF253O75346 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF253O75346 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.04□□□□□ -0.16
ZNF253O75346 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF253O75346 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF253O75346 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ZNF253O75346 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.03□□□□□ -0.16
ZNF253O75346 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF253O75346 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF253O75346 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF253O75346 AC108860.2-201ENST00000562760 2183 ntBASIC14.03□□□□□ -0.16
ZNF253O75346 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.03□□□□□ -0.16
ZNF253O75346 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF253O75346 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF253O75346 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF253O75346 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF253O75346 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.03□□□□□ -0.16
ZNF253O75346 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
ZNF253O75346 MIR564-202ENST00000385049 94 ntBASIC14.03□□□□□ -0.16
ZNF253O75346 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF253O75346 HLA-L-209ENST00000420110 1011 ntBASIC14.03□□□□□ -0.16
ZNF253O75346 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF253O75346 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.03□□□□□ -0.16
ZNF253O75346 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.03□□□□□ -0.16
ZNF253O75346 RARRES2P10-201ENST00000564312 460 ntBASIC14.03□□□□□ -0.16
ZNF253O75346 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.03□□□□□ -0.16
ZNF253O75346 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.03□□□□□ -0.16
ZNF253O75346 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF253O75346 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF253O75346 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF253O75346 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.03□□□□□ -0.16
ZNF253O75346 NKILA-202ENST00000614771 2598 ntBASIC14.03□□□□□ -0.16
ZNF253O75346 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF253O75346 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF253O75346 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF253O75346 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF253O75346 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF253O75346 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF253O75346 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF253O75346 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF253O75346 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF253O75346 AC011676.5-201ENST00000624864 2660 ntBASIC14.02□□□□□ -0.16
ZNF253O75346 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF253O75346 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
ZNF253O75346 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF253O75346 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF253O75346 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF253O75346 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.02□□□□□ -0.16
ZNF253O75346 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF253O75346 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF253O75346 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.02□□□□□ -0.16
ZNF253O75346 AC034236.2-201ENST00000606662 1610 ntBASIC14.02□□□□□ -0.16
ZNF253O75346 GMCL1P1-201ENST00000463439 1581 ntBASIC14.02□□□□□ -0.16
ZNF253O75346 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF253O75346 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.02□□□□□ -0.16
ZNF253O75346 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.02□□□□□ -0.16
ZNF253O75346 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.02□□□□□ -0.16
ZNF253O75346 FSCN1P1-201ENST00000568912 1481 ntBASIC14.02□□□□□ -0.16
ZNF253O75346 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
ZNF253O75346 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
ZNF253O75346 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF253O75346 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF253O75346 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
ZNF253O75346 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.02□□□□□ -0.17
ZNF253O75346 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF253O75346 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.02□□□□□ -0.17
ZNF253O75346 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.02□□□□□ -0.17
ZNF253O75346 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
ZNF253O75346 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.02□□□□□ -0.17
ZNF253O75346 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.02□□□□□ -0.17
ZNF253O75346 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.02□□□□□ -0.17
ZNF253O75346 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.02□□□□□ -0.17
ZNF253O75346 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.02□□□□□ -0.17
ZNF253O75346 MIR6786-201ENST00000616843 113 ntBASIC14.02□□□□□ -0.17
ZNF253O75346 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
ZNF253O75346 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.02□□□□□ -0.17
ZNF253O75346 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF253O75346 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF253O75346 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF253O75346 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF253O75346 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
ZNF253O75346 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF253O75346 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF253O75346 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.02□□□□□ -0.17
ZNF253O75346 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF253O75346 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF253O75346 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF253O75346 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.02□□□□□ -0.17
ZNF253O75346 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms