Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.07■□□□□ 0.32
SCN2BO60939 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN2BO60939 ECEL1P2-202ENST00000465689 757 ntBASIC17.07■□□□□ 0.32
SCN2BO60939 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.07■□□□□ 0.32
SCN2BO60939 NAPSB-206ENST00000562112 1266 ntBASIC17.07■□□□□ 0.32
SCN2BO60939 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCN2BO60939 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCN2BO60939 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SCN2BO60939 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN2BO60939 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.07■□□□□ 0.32
SCN2BO60939 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN2BO60939 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.07■□□□□ 0.32
SCN2BO60939 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN2BO60939 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN2BO60939 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.07■□□□□ 0.32
SCN2BO60939 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.07■□□□□ 0.32
SCN2BO60939 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.07■□□□□ 0.32
SCN2BO60939 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.07■□□□□ 0.32
SCN2BO60939 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN2BO60939 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN2BO60939 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.07■□□□□ 0.32
SCN2BO60939 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SCN2BO60939 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCN2BO60939 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN2BO60939 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN2BO60939 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
SCN2BO60939 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.06■□□□□ 0.32
SCN2BO60939 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCN2BO60939 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SCN2BO60939 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCN2BO60939 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SCN2BO60939 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCN2BO60939 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCN2BO60939 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCN2BO60939 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.06■□□□□ 0.32
SCN2BO60939 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.06■□□□□ 0.32
SCN2BO60939 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SCN2BO60939 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCN2BO60939 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SCN2BO60939 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCN2BO60939 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCN2BO60939 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCN2BO60939 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SCN2BO60939 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCN2BO60939 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.06■□□□□ 0.32
SCN2BO60939 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.06■□□□□ 0.32
SCN2BO60939 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SCN2BO60939 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.06■□□□□ 0.32
SCN2BO60939 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.06■□□□□ 0.32
SCN2BO60939 HMGA1P5-201ENST00000412453 271 ntBASIC17.06■□□□□ 0.32
SCN2BO60939 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.06■□□□□ 0.32
SCN2BO60939 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.06■□□□□ 0.32
SCN2BO60939 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.06■□□□□ 0.32
SCN2BO60939 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.06■□□□□ 0.32
SCN2BO60939 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.06■□□□□ 0.32
SCN2BO60939 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCN2BO60939 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCN2BO60939 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SCN2BO60939 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCN2BO60939 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.06■□□□□ 0.32
SCN2BO60939 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCN2BO60939 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCN2BO60939 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCN2BO60939 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SCN2BO60939 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
SCN2BO60939 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCN2BO60939 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCN2BO60939 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCN2BO60939 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.05■□□□□ 0.32
SCN2BO60939 AL355312.1-201ENST00000407115 2176 ntBASIC17.05■□□□□ 0.32
SCN2BO60939 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCN2BO60939 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCN2BO60939 AC141586.5-201ENST00000624546 2050 ntBASIC17.05■□□□□ 0.32
SCN2BO60939 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCN2BO60939 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCN2BO60939 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCN2BO60939 PVRIG2P-201ENST00000435460 978 ntBASIC17.05■□□□□ 0.32
SCN2BO60939 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.05■□□□□ 0.32
SCN2BO60939 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.05■□□□□ 0.32
SCN2BO60939 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.05■□□□□ 0.32
SCN2BO60939 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.05■□□□□ 0.32
SCN2BO60939 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.05■□□□□ 0.32
SCN2BO60939 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
SCN2BO60939 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCN2BO60939 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCN2BO60939 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCN2BO60939 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.05■□□□□ 0.32
SCN2BO60939 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SCN2BO60939 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCN2BO60939 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCN2BO60939 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCN2BO60939 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SCN2BO60939 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCN2BO60939 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCN2BO60939 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCN2BO60939 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SCN2BO60939 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.05■□□□□ 0.32
SCN2BO60939 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCN2BO60939 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCN2BO60939 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms