Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HCN1O60741 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HCN1O60741 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.82■□□□□ 0.28
HCN1O60741 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.82■□□□□ 0.28
HCN1O60741 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.82■□□□□ 0.28
HCN1O60741 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
HCN1O60741 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HCN1O60741 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HCN1O60741 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HCN1O60741 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.82■□□□□ 0.28
HCN1O60741 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HCN1O60741 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HCN1O60741 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HCN1O60741 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HCN1O60741 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HCN1O60741 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.82■□□□□ 0.28
HCN1O60741 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HCN1O60741 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.82■□□□□ 0.28
HCN1O60741 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HCN1O60741 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HCN1O60741 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HCN1O60741 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
HCN1O60741 AC135776.1-201ENST00000319817 2481 ntBASIC16.81■□□□□ 0.28
HCN1O60741 AC034236.2-201ENST00000606662 1610 ntBASIC16.81■□□□□ 0.28
HCN1O60741 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HCN1O60741 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.81■□□□□ 0.28
HCN1O60741 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HCN1O60741 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HCN1O60741 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HCN1O60741 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HCN1O60741 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.81■□□□□ 0.28
HCN1O60741 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HCN1O60741 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HCN1O60741 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.81■□□□□ 0.28
HCN1O60741 KRT18P41-201ENST00000518924 1277 ntBASIC16.81■□□□□ 0.28
HCN1O60741 AC104390.1-201ENST00000555663 520 ntBASIC16.81■□□□□ 0.28
HCN1O60741 AC069148.1-201ENST00000608741 768 ntBASIC16.81■□□□□ 0.28
HCN1O60741 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HCN1O60741 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HCN1O60741 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
HCN1O60741 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HCN1O60741 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HCN1O60741 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.81■□□□□ 0.28
HCN1O60741 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.81■□□□□ 0.28
HCN1O60741 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.81■□□□□ 0.28
HCN1O60741 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HCN1O60741 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HCN1O60741 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.8■□□□□ 0.28
HCN1O60741 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.8■□□□□ 0.28
HCN1O60741 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HCN1O60741 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.8■□□□□ 0.28
HCN1O60741 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.8■□□□□ 0.28
HCN1O60741 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.8■□□□□ 0.28
HCN1O60741 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.8■□□□□ 0.28
HCN1O60741 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.8■□□□□ 0.28
HCN1O60741 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.8■□□□□ 0.28
HCN1O60741 MIR3180-4-201ENST00000582223 153 ntBASIC16.8■□□□□ 0.28
HCN1O60741 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.8■□□□□ 0.28
HCN1O60741 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.8■□□□□ 0.28
HCN1O60741 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.8■□□□□ 0.28
HCN1O60741 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HCN1O60741 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.8■□□□□ 0.28
HCN1O60741 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HCN1O60741 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.8■□□□□ 0.28
HCN1O60741 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HCN1O60741 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HCN1O60741 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.8■□□□□ 0.28
HCN1O60741 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCN1O60741 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.79■□□□□ 0.28
HCN1O60741 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.79■□□□□ 0.28
HCN1O60741 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HCN1O60741 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCN1O60741 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.79■□□□□ 0.28
HCN1O60741 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCN1O60741 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
HCN1O60741 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms