Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 GMCL1P1-201ENST00000463439 1581 ntBASIC14.59□□□□□ -0.07
LINC00862A6NCI5 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.58□□□□□ -0.07
LINC00862A6NCI5 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINC00862A6NCI5 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.58□□□□□ -0.07
LINC00862A6NCI5 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 SNX3-202ENST00000349379 890 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 KRT16P3-201ENST00000439127 1283 ntBASIC14.58□□□□□ -0.08
LINC00862A6NCI5 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 MIR3621-201ENST00000580529 85 ntBASIC14.58□□□□□ -0.08
LINC00862A6NCI5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 SF1-220ENST00000626028 704 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 MYLKP1-201ENST00000509077 1580 ntBASIC14.58□□□□□ -0.08
LINC00862A6NCI5 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.58□□□□□ -0.08
LINC00862A6NCI5 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 CYP21A1P-202ENST00000354927 1481 ntBASIC14.57□□□□□ -0.08
LINC00862A6NCI5 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00862A6NCI5 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 AC078925.2-201ENST00000624013 1973 ntBASIC14.56□□□□□ -0.08
LINC00862A6NCI5 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms