Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA7Q9Y5G6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA7Q9Y5G6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA7Q9Y5G6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 AC138028.4-201ENST00000564984 1845 ntBASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 AL845331.1-201ENST00000424978 1190 ntBASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 HLA-F-220ENST00000434407 884 ntBASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGA7Q9Y5G6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 CHCHD2P8-201ENST00000429873 447 ntBASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 MCCD1P1-208ENST00000445732 328 ntBASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 AC036111.1-201ENST00000533973 1582 ntBASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 AP002414.4-201ENST00000589764 1148 ntBASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA7Q9Y5G6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 KRT8P10-201ENST00000450021 1447 ntBASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 SEC1P-202ENST00000473944 940 ntBASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGA7Q9Y5G6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms