Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 AL645929.1-201ENST00000420084 975 ntBASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 TSPY12P-201ENST00000421279 868 ntBASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 AL136038.3-201ENST00000561909 1096 ntBASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 AL031133.1-201ENST00000406807 723 ntBASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 AL121956.5-201ENST00000625261 221 ntBASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN4Q9NRR5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 RNF126P1-202ENST00000569893 925 ntBASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 AL390719.2-201ENST00000606993 987 ntBASIC16.55■□□□□ 0.24
UBQLN4Q9NRR5 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms