Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 BRD9-218ENST00000519838 396 ntTSL 221.61■■□□□ 1.052e-9■■□□□ 11.7
DROSHAQ9NRR4 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.943e-7■■□□□ 11.7
DROSHAQ9NRR4 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC20.24■□□□□ 0.833e-7■■□□□ 11.7
DROSHAQ9NRR4 COLGALT1-202ENST00000593832 2941 ntTSL 219.78■□□□□ 0.762e-7■■□□□ 11.7
DROSHAQ9NRR4 PFKP-211ENST00000495715 143 ntTSL 319.37■□□□□ 0.693e-7■■□□□ 11.7
DROSHAQ9NRR4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.663e-7■■□□□ 11.7
DROSHAQ9NRR4 BRD9-204ENST00000483173 2120 ntTSL 2 BASIC19.1■□□□□ 0.652e-9■■□□□ 11.7
DROSHAQ9NRR4 KDM5B-201ENST00000235790 4418 ntTSL 218.86■□□□□ 0.613e-7■■□□□ 11.7
DROSHAQ9NRR4 NCAPG2-210ENST00000491792 581 ntTSL 318.8■□□□□ 0.63e-7■■□□□ 11.7
DROSHAQ9NRR4 ZNF83-213ENST00000598536 522 ntTSL 4 BASIC18.14■□□□□ 0.493e-7■■□□□ 11.7
DROSHAQ9NRR4 GCLM-202ENST00000462183 583 ntTSL 317.95■□□□□ 0.463e-7■■□□□ 11.7
DROSHAQ9NRR4 BRD9-203ENST00000475706 744 ntTSL 1 (best)17.66■□□□□ 0.422e-9■■□□□ 11.7
DROSHAQ9NRR4 RPS26-201ENST00000356464 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.383e-7■■□□□ 11.7
DROSHAQ9NRR4 SNUPN-203ENST00000563875 406 ntTSL 317.42■□□□□ 0.383e-7■■□□□ 11.7
DROSHAQ9NRR4 BRD9-213ENST00000495794 4865 ntTSL 217.14■□□□□ 0.332e-9■■□□□ 11.7
DROSHAQ9NRR4 NCAPG2-207ENST00000472591 554 ntTSL 416.9■□□□□ 0.33e-7■■□□□ 11.7
DROSHAQ9NRR4 NPRL3-208ENST00000473674 855 ntTSL 316.77■□□□□ 0.283e-7■■□□□ 11.7
DROSHAQ9NRR4 ZNF83-218ENST00000601257 704 ntTSL 3 BASIC16.3■□□□□ 0.23e-7■■□□□ 11.7
DROSHAQ9NRR4 RPS26-203ENST00000552361 623 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.153e-7■■□□□ 11.7
DROSHAQ9NRR4 IFI30-202ENST00000597802 411 ntTSL 315.95■□□□□ 0.143e-7■■□□□ 11.7
DROSHAQ9NRR4 SNUPN-202ENST00000563793 661 ntTSL 415.73■□□□□ 0.113e-7■■□□□ 11.7
DROSHAQ9NRR4 RPS26-202ENST00000548590 1204 ntTSL 514.71□□□□□ -0.063e-7■■□□□ 11.7
DROSHAQ9NRR4 ZNF83-206ENST00000595171 578 ntTSL 413.83□□□□□ -0.23e-7■■□□□ 11.7
DROSHAQ9NRR4 BRD9-209ENST00000490814 3477 ntTSL 1 (best)13.72□□□□□ -0.212e-9■■□□□ 11.7
DROSHAQ9NRR4 ZNF83-219ENST00000602232 575 ntTSL 412.82□□□□□ -0.363e-7■■□□□ 11.7
DROSHAQ9NRR4 TMOD3-201ENST00000308580 8255 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.463e-7■■□□□ 11.7
DROSHAQ9NRR4 ZNF83-208ENST00000596440 561 ntTSL 411.78□□□□□ -0.523e-7■■□□□ 11.7
DROSHAQ9NRR4 SNUPN-204ENST00000564086 644 ntTSL 211.49□□□□□ -0.573e-7■■□□□ 11.7
DROSHAQ9NRR4 BRD9-211ENST00000494422 449 ntTSL 39.81□□□□□ -0.842e-9■■□□□ 11.7
DROSHAQ9NRR4 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC9.58□□□□□ -0.883e-7■■□□□ 11.7
DROSHAQ9NRR4 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC8.21□□□□□ -1.13e-7■■□□□ 11.7
DROSHAQ9NRR4 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.413e-7■■□□□ 11.7
DROSHAQ9NRR4 RAB10-204ENST00000495146 1292 ntTSL 536.63■■■■□ 3.453e-7■■□□□ 11.6
DROSHAQ9NRR4 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.443e-7■■□□□ 11.6
DROSHAQ9NRR4 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC44.47■■■■■ 4.714e-8■■□□□ 11.6
DROSHAQ9NRR4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC33.12■■■□□ 2.894e-8■■□□□ 11.6
DROSHAQ9NRR4 ASIC4-205ENST00000474489 2403 ntTSL 1 (best)24.42■■□□□ 1.54e-7■■□□□ 11.6
DROSHAQ9NRR4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.164e-7■■□□□ 11.6
DROSHAQ9NRR4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.094e-7■■□□□ 11.6
DROSHAQ9NRR4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC24.1■■□□□ 1.454e-31■■□□□ 11.6
DROSHAQ9NRR4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.994e-31■■□□□ 11.6
DROSHAQ9NRR4 SLC17A9-203ENST00000411611 565 ntTSL 221.6■■□□□ 1.059e-9■■□□□ 11.6
DROSHAQ9NRR4 SLC25A37-201ENST00000290075 1889 ntTSL 1 (best)32.21■■■□□ 2.752e-7■■□□□ 11.6
DROSHAQ9NRR4 SLC25A37-202ENST00000417331 735 ntTSL 529.85■■■□□ 2.372e-7■■□□□ 11.6
DROSHAQ9NRR4 SLC25A37-205ENST00000519192 479 ntTSL 226.85■■□□□ 1.892e-7■■□□□ 11.6
DROSHAQ9NRR4 SLC25A37-212ENST00000523930 823 ntTSL 523.05■■□□□ 1.282e-7■■□□□ 11.6
DROSHAQ9NRR4 SLC25A37-204ENST00000518881 3404 ntTSL 1 (best)18.31■□□□□ 0.522e-7■■□□□ 11.6
DROSHAQ9NRR4 SLC25A37-207ENST00000520654 3018 ntTSL 1 (best)13.86□□□□□ -0.192e-7■■□□□ 11.6
DROSHAQ9NRR4 MVD-209ENST00000565149 2352 ntTSL 1 (best)26.79■■□□□ 1.882e-9■■□□□ 11.6
DROSHAQ9NRR4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC42.52■■■■■ 4.48e-7■■□□□ 11.6
DROSHAQ9NRR4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.951e-6■■□□□ 11.6
DROSHAQ9NRR4 SLC38A2-213ENST00000553252 846 ntTSL 226.1■■□□□ 1.772e-9■■□□□ 11.6
DROSHAQ9NRR4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC32.69■■■□□ 2.825e-10■■□□□ 11.6
DROSHAQ9NRR4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC31.89■■■□□ 2.71e-7■■□□□ 11.6
DROSHAQ9NRR4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 21e-7■■□□□ 11.6
DROSHAQ9NRR4 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.611e-7■■□□□ 11.6
DROSHAQ9NRR4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC38.89■■■■□ 3.822e-16■■□□□ 11.6
DROSHAQ9NRR4 UBA52-212ENST00000599256 927 ntTSL 235.99■■■■□ 3.352e-16■■□□□ 11.6
DROSHAQ9NRR4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC28.43■■■□□ 2.142e-16■■□□□ 11.6
DROSHAQ9NRR4 UBA52-211ENST00000598814 550 ntTSL 1 (best)24.98■■□□□ 1.592e-16■■□□□ 11.6
DROSHAQ9NRR4 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.072e-16■■□□□ 11.6
DROSHAQ9NRR4 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.772e-16■■□□□ 11.6
DROSHAQ9NRR4 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.642e-16■■□□□ 11.6
DROSHAQ9NRR4 UBA52-207ENST00000596273 764 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.22e-16■■□□□ 11.6
DROSHAQ9NRR4 UBA52-201ENST00000430157 572 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.012e-16■■□□□ 11.6
DROSHAQ9NRR4 UBA52-205ENST00000595683 779 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.052e-16■■□□□ 11.6
DROSHAQ9NRR4 UBA52-202ENST00000442744 2845 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.222e-16■■□□□ 11.6
DROSHAQ9NRR4 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.912e-16■■□□□ 11.6
DROSHAQ9NRR4 TUBA1B-205ENST00000549870 565 ntTSL 418.89■□□□□ 0.611e-9■■□□□ 11.6
DROSHAQ9NRR4 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.115e-9■■□□□ 11.6
DROSHAQ9NRR4 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.035e-9■■□□□ 11.6
DROSHAQ9NRR4 VMP1-208ENST00000588617 884 ntTSL 46.39□□□□□ -1.391e-14■■□□□ 11.5
DROSHAQ9NRR4 VMP1-205ENST00000587470 995 ntTSL 25.56□□□□□ -1.521e-14■■□□□ 11.5
DROSHAQ9NRR4 VMP1-212ENST00000591782 729 ntTSL 53.44□□□□□ -1.861e-14■■□□□ 11.5
DROSHAQ9NRR4 DOCK6-203ENST00000585904 554 ntTSL 423.91■■□□□ 1.422e-6■■□□□ 11.5
DROSHAQ9NRR4 DOCK6-212ENST00000590680 1391 ntTSL 522.98■■□□□ 1.272e-6■■□□□ 11.5
DROSHAQ9NRR4 DOCK6-201ENST00000294618 6358 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.092e-6■■□□□ 11.5
DROSHAQ9NRR4 DOCK6-207ENST00000587656 4009 ntTSL 513.69□□□□□ -0.222e-6■■□□□ 11.5
DROSHAQ9NRR4 SLC38A2-210ENST00000551405 526 ntTSL 427.08■■□□□ 1.931e-9■■□□□ 11.5
DROSHAQ9NRR4 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.551e-9■■□□□ 11.5
DROSHAQ9NRR4 SLC38A2-208ENST00000549258 4384 ntTSL 25.16□□□□□ -1.581e-9■■□□□ 11.5
DROSHAQ9NRR4 PDXK-206ENST00000398085 796 ntTSL 333.67■■■□□ 2.983e-8■■□□□ 11.5
DROSHAQ9NRR4 PDXK-212ENST00000470029 583 ntTSL 329.98■■■□□ 2.393e-8■■□□□ 11.5
DROSHAQ9NRR4 PDXK-218ENST00000498040 888 ntTSL 528.03■■■□□ 2.083e-8■■□□□ 11.5
DROSHAQ9NRR4 PDXK-213ENST00000472777 460 ntTSL 516.85■□□□□ 0.293e-8■■□□□ 11.5
DROSHAQ9NRR4 PDXK-216ENST00000481512 583 ntTSL 514.98□□□□□ -0.013e-8■■□□□ 11.5
DROSHAQ9NRR4 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.85□□□□□ -0.033e-8■■□□□ 11.5
DROSHAQ9NRR4 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.293e-8■■□□□ 11.5
DROSHAQ9NRR4 GLI4-204ENST00000517530 563 ntTSL 233.28■■■□□ 2.925e-8■■□□□ 11.5
DROSHAQ9NRR4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.885e-8■■□□□ 11.5
DROSHAQ9NRR4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.865e-8■■□□□ 11.5
DROSHAQ9NRR4 GLI4-209ENST00000522479 435 ntTSL 332.78■■■□□ 2.845e-8■■□□□ 11.5
DROSHAQ9NRR4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC29.72■■■□□ 2.355e-8■■□□□ 11.5
DROSHAQ9NRR4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC26.18■■□□□ 1.785e-8■■□□□ 11.5
DROSHAQ9NRR4 GLI4-205ENST00000519876 585 ntTSL 326.11■■□□□ 1.775e-8■■□□□ 11.5
DROSHAQ9NRR4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC24.11■■□□□ 1.455e-8■■□□□ 11.5
DROSHAQ9NRR4 GET4-205ENST00000441491 682 ntTSL 523.49■■□□□ 1.354e-6■■□□□ 11.5
DROSHAQ9NRR4 GLI4-206ENST00000520021 361 ntTSL 317.64■□□□□ 0.415e-8■■□□□ 11.5
DROSHAQ9NRR4 NR2C2-204ENST00000413118 564 ntTSL 431.67■■■□□ 2.661e-6■■□□□ 11.5
DROSHAQ9NRR4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.421e-6■■□□□ 11.5
Retrieved 100 of 16,331 protein–RNA pairs in 78.9 ms