RNA–Protein interactions for RNA: ENST00000564086.5

SNUPN-204, Transcript of snurportin 1, humanhuman

TSL 2

Gene SNUPN, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-204ENST00000564086 AEBP2Q6ZN18 517 aaPredicted RBP25.07■■□□□ 1.6
SNUPN-204ENST00000564086 CHIC1Q5VXU3 224 aa24.36■■□□□ 1.49
SNUPN-204ENST00000564086 SENP3Q9H4L4 574 aaPredicted RBP21.44■■□□□ 1.02
SNUPN-204ENST00000564086 PHF23Q9BUL5 403 aaPredicted RBP21.33■■□□□ 1.01
SNUPN-204ENST00000564086 FOXD1Q16676 465 aa19.84■□□□□ 0.77
SNUPN-204ENST00000564086 PLPPR3Q6T4P5 718 aa19.76■□□□□ 0.75
SNUPN-204ENST00000564086 ADRA2BP18089 450 aa18.92■□□□□ 0.62
SNUPN-204ENST00000564086 PPP6R1Q9UPN7 881 aa18.89■□□□□ 0.61
SNUPN-204ENST00000564086 PIAS4Q8N2W9 510 aaPredicted RBP18.74■□□□□ 0.59
SNUPN-204ENST00000564086 MSH5O43196 834 aa18.47■□□□□ 0.55
SNUPN-204ENST00000564086 NISCHQ9Y2I1 1504 aa18.23■□□□□ 0.51
SNUPN-204ENST00000564086 SCAF1Q9H7N4 1312 aaKnown RBP17.45■□□□□ 0.38
SNUPN-204ENST00000564086 PPP4R3CPQ6ZMV5 832 aa17.36■□□□□ 0.37
SNUPN-204ENST00000564086 MAPK8IP2Q13387 824 aaPredicted RBP17.2■□□□□ 0.34
SNUPN-204ENST00000564086 POTEDQ86YR6 584 aa17.1■□□□□ 0.33
SNUPN-204ENST00000564086 DMRT2Q9Y5R5 561 aa17.03■□□□□ 0.32
SNUPN-204ENST00000564086 NCBP3Q53F19 620 aaKnown RBP16.94■□□□□ 0.3
SNUPN-204ENST00000564086 CNKSR2Q8WXI2 1034 aa16.94■□□□□ 0.3
SNUPN-204ENST00000564086 KCNA4P22459 653 aa16.69■□□□□ 0.26
SNUPN-204ENST00000564086 RNF216Q9NWF9 866 aaPredicted RBP16.64■□□□□ 0.25
SNUPN-204ENST00000564086 HOXD11P31277 338 aaPredicted RBP16.58■□□□□ 0.24
SNUPN-204ENST00000564086 NPM3O75607 178 aaKnown RBP16.57■□□□□ 0.24
SNUPN-204ENST00000564086 ABCC9O60706 1549 aa16.54■□□□□ 0.24
SNUPN-204ENST00000564086 DCAF8L1A6NGE4 600 aa16.43■□□□□ 0.22
SNUPN-204ENST00000564086 CCDC180Q9P1Z9 1646 aa16.39■□□□□ 0.21
SNUPN-204ENST00000564086 DNAJC5BQ9UF47 199 aa16.06■□□□□ 0.16
SNUPN-204ENST00000564086 SLC4A1APQ9BWU0 796 aaKnown RBP15.93■□□□□ 0.14
SNUPN-204ENST00000564086 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.92■□□□□ 0.14
SNUPN-204ENST00000564086 RNF39Q9H2S5 420 aa15.74■□□□□ 0.11
SNUPN-204ENST00000564086 SLC4A2P04920 1241 aa15.65■□□□□ 0.1
SNUPN-204ENST00000564086 RB1CC1Q8TDY2 1594 aa15.63■□□□□ 0.09
SNUPN-204ENST00000564086 C1QBPQ07021 282 aaKnown RBP15.59■□□□□ 0.09
SNUPN-204ENST00000564086 CACNB1Q02641 598 aaPredicted RBP15.57■□□□□ 0.08
SNUPN-204ENST00000564086 U3KPZ7 1027 aaPredicted RBP15.53■□□□□ 0.08
SNUPN-204ENST00000564086 NACADO15069 1562 aa15.48■□□□□ 0.07
SNUPN-204ENST00000564086 FOXD4L1Q9NU39 408 aa15.47■□□□□ 0.07
SNUPN-204ENST00000564086 DCAF8L2P0C7V8 631 aa15.46■□□□□ 0.07
SNUPN-204ENST00000564086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.4■□□□□ 0.06
SNUPN-204ENST00000564086 HNRNPUL2Q1KMD3 747 aaKnown RBP15.4■□□□□ 0.06
SNUPN-204ENST00000564086 UNC13AQ9UPW8 1703 aa15.4■□□□□ 0.06
SNUPN-204ENST00000564086 MYCNP04198 464 aaPredicted RBP15.38■□□□□ 0.05
SNUPN-204ENST00000564086 PABPN1Q86U42 306 aaKnown RBP eCLIP15.38■□□□□ 0.05
SNUPN-204ENST00000564086 APLP2Q06481 763 aa15.33■□□□□ 0.04
SNUPN-204ENST00000564086 SAMD1Q6SPF0 538 aaPredicted RBP15.3■□□□□ 0.04
SNUPN-204ENST00000564086 ZBTB22O15209 634 aa15.28■□□□□ 0.04
SNUPN-204ENST00000564086 EHMT2Q96KQ7 1210 aa15.25■□□□□ 0.03
SNUPN-204ENST00000564086 BICRAQ9NZM4 1560 aa15.24■□□□□ 0.03
SNUPN-204ENST00000564086 CAPN15O75808 1086 aa15.22■□□□□ 0.03
SNUPN-204ENST00000564086 MYO15BQ96JP2 1530 aa15.18■□□□□ 0.02
SNUPN-204ENST00000564086 SPINK5Q9NQ38 1064 aaPredicted RBP15.16■□□□□ 0.02
SNUPN-204ENST00000564086 ZCCHC6Q5VYS8 1495 aaKnown RBP15.09■□□□□ 0.01
SNUPN-204ENST00000564086 TRHP20396 242 aaPredicted RBP15.08■□□□□ 0
SNUPN-204ENST00000564086 CSRNP3Q8WYN3 585 aa15.08■□□□□ 0
SNUPN-204ENST00000564086 ZNF219Q9P2Y4 722 aaPredicted RBP15.08■□□□□ 0
SNUPN-204ENST00000564086 SCRIBQ14160 1630 aa15.02□□□□□ -0.01
SNUPN-204ENST00000564086 DCAF1Q9Y4B6 1507 aa14.98□□□□□ -0.01
SNUPN-204ENST00000564086 ATXN8OSP0DMR3 200 aa14.95□□□□□ -0.02
SNUPN-204ENST00000564086 CC2D2AQ9P2K1 1620 aa14.92□□□□□ -0.02
SNUPN-204ENST00000564086 DSG3P32926 999 aa14.91□□□□□ -0.02
SNUPN-204ENST00000564086 SHROOM4Q9ULL8 1493 aa14.88□□□□□ -0.03
SNUPN-204ENST00000564086 ATF5Q9Y2D1 282 aaPredicted RBP14.87□□□□□ -0.03
SNUPN-204ENST00000564086 ABCB7O75027 752 aa14.86□□□□□ -0.03
SNUPN-204ENST00000564086 CECR2Q9BXF3 1484 aa14.86□□□□□ -0.03
SNUPN-204ENST00000564086 EIF4G1Q04637 1599 aaKnown RBP14.84□□□□□ -0.03
SNUPN-204ENST00000564086 POLA2Q14181 598 aa14.75□□□□□ -0.05
SNUPN-204ENST00000564086 ZBTB12Q9Y330 459 aaPredicted RBP14.57□□□□□ -0.08
SNUPN-204ENST00000564086 FBLN2P98095 1184 aa14.43□□□□□ -0.1
SNUPN-204ENST00000564086 RBM42Q9BTD8 480 aaKnown RBP14.32□□□□□ -0.12
SNUPN-204ENST00000564086 DNAJC5Q9H3Z4 198 aa14.29□□□□□ -0.12
SNUPN-204ENST00000564086 NCAPD3P42695 1498 aa14.28□□□□□ -0.12
SNUPN-204ENST00000564086 SMARCA4P51532 1647 aa14.26□□□□□ -0.13
SNUPN-204ENST00000564086 ATAD2BQ9ULI0 1458 aa14.26□□□□□ -0.13
SNUPN-204ENST00000564086 OSCARQ8IYS5 282 aa14.24□□□□□ -0.13
SNUPN-204ENST00000564086 ERCC6Q03468 1493 aa14.24□□□□□ -0.13
SNUPN-204ENST00000564086 MKRN4PQ13434 485 aaPredicted RBP14.22□□□□□ -0.13
SNUPN-204ENST00000564086 NESP48681 1621 aa14.2□□□□□ -0.14
SNUPN-204ENST00000564086 SMARCA2P51531 1590 aa14.2□□□□□ -0.14
SNUPN-204ENST00000564086 HMGXB3Q12766 1538 aa14.19□□□□□ -0.14
SNUPN-204ENST00000564086 CUX2O14529 1486 aa14.18□□□□□ -0.14
SNUPN-204ENST00000564086 BAZ1AQ9NRL2 1556 aaPredicted RBP14.13□□□□□ -0.15
SNUPN-204ENST00000564086 BAZ1BQ9UIG0 1483 aaKnown RBP14.12□□□□□ -0.15
SNUPN-204ENST00000564086 SPDYE2BA6NHP3 402 aa14.11□□□□□ -0.15
SNUPN-204ENST00000564086 SPDYE6P0CI01 402 aa14.11□□□□□ -0.15
SNUPN-204ENST00000564086 SPDYE2Q495Y8 402 aa14.11□□□□□ -0.15
SNUPN-204ENST00000564086 MROH2BQ7Z745 1585 aa14.09□□□□□ -0.15
SNUPN-204ENST00000564086 PEG3Q9GZU2 1588 aa14.07□□□□□ -0.16
SNUPN-204ENST00000564086 AKT1S1Q96B36 256 aa14.05□□□□□ -0.16
SNUPN-204ENST00000564086 THOC2Q8NI27 1593 aaKnown RBP14.05□□□□□ -0.16
SNUPN-204ENST00000564086 ZNF692Q9BU19 519 aaPredicted RBP14.04□□□□□ -0.16
SNUPN-204ENST00000564086 KIF21AQ7Z4S6 1674 aa14.03□□□□□ -0.16
SNUPN-204ENST00000564086 LAMC3Q9Y6N6 1575 aa14□□□□□ -0.17
SNUPN-204ENST00000564086 WIZO95785 1651 aa13.96□□□□□ -0.17
SNUPN-204ENST00000564086 SPDYE4A6NLX3 237 aa13.91□□□□□ -0.18
SNUPN-204ENST00000564086 SSUH2Q9Y2M2 353 aa13.91□□□□□ -0.18
SNUPN-204ENST00000564086 REM2Q8IYK8 340 aaPredicted RBP13.89□□□□□ -0.19
SNUPN-204ENST00000564086 PDS5BQ9NTI5 1447 aa13.89□□□□□ -0.19
SNUPN-204ENST00000564086 CADPSQ9ULU8 1353 aa13.85□□□□□ -0.19
SNUPN-204ENST00000564086 MRC2Q9UBG0 1479 aa13.82□□□□□ -0.2
SNUPN-204ENST00000564086 WDR62O43379 1518 aa13.8□□□□□ -0.2
SNUPN-204ENST00000564086 SPDYE1Q8NFV5 336 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms