RNA–Protein interactions for RNA: ENST00000549870.5

TUBA1B-205, Transcript of tubulin alpha 1b, humanhuman

TSL 4

Gene TUBA1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-205ENST00000549870 AEBP2Q6ZN18 517 aaPredicted RBP33.84■■■■□ 3.01
TUBA1B-205ENST00000549870 CHIC1Q5VXU3 224 aa33.74■■■□□ 2.99
TUBA1B-205ENST00000549870 NISCHQ9Y2I1 1504 aa30■■■□□ 2.39
TUBA1B-205ENST00000549870 PHF23Q9BUL5 403 aaPredicted RBP29.8■■■□□ 2.36
TUBA1B-205ENST00000549870 SENP3Q9H4L4 574 aaPredicted RBP28.52■■■□□ 2.16
TUBA1B-205ENST00000549870 PLPPR3Q6T4P5 718 aa27.7■■■□□ 2.02
TUBA1B-205ENST00000549870 ABCC9O60706 1549 aa27■■□□□ 1.91
TUBA1B-205ENST00000549870 CCDC180Q9P1Z9 1646 aa26.85■■□□□ 1.89
TUBA1B-205ENST00000549870 FOXD1Q16676 465 aa26.42■■□□□ 1.82
TUBA1B-205ENST00000549870 PPP6R1Q9UPN7 881 aa26.04■■□□□ 1.76
TUBA1B-205ENST00000549870 ADRA2BP18089 450 aa26.01■■□□□ 1.75
TUBA1B-205ENST00000549870 RB1CC1Q8TDY2 1594 aa25.63■■□□□ 1.69
TUBA1B-205ENST00000549870 DCAF8L2P0C7V8 631 aa25.46■■□□□ 1.67
TUBA1B-205ENST00000549870 NACADO15069 1562 aa25.46■■□□□ 1.67
TUBA1B-205ENST00000549870 DNAJC5BQ9UF47 199 aa25.45■■□□□ 1.66
TUBA1B-205ENST00000549870 PABPN1Q86U42 306 aaKnown RBP eCLIP25.2■■□□□ 1.62
TUBA1B-205ENST00000549870 MYO15BQ96JP2 1530 aa25.1■■□□□ 1.61
TUBA1B-205ENST00000549870 PIAS4Q8N2W9 510 aaPredicted RBP25.03■■□□□ 1.6
TUBA1B-205ENST00000549870 UNC13AQ9UPW8 1703 aa24.98■■□□□ 1.59
TUBA1B-205ENST00000549870 BICRAQ9NZM4 1560 aa24.88■■□□□ 1.57
TUBA1B-205ENST00000549870 ZCCHC6Q5VYS8 1495 aaKnown RBP24.83■■□□□ 1.56
TUBA1B-205ENST00000549870 KCNA4P22459 653 aa24.8■■□□□ 1.56
TUBA1B-205ENST00000549870 DCAF1Q9Y4B6 1507 aa24.76■■□□□ 1.55
TUBA1B-205ENST00000549870 SHROOM4Q9ULL8 1493 aa24.53■■□□□ 1.52
TUBA1B-205ENST00000549870 PPP4R3CPQ6ZMV5 832 aa24.51■■□□□ 1.51
TUBA1B-205ENST00000549870 SCRIBQ14160 1630 aa24.5■■□□□ 1.51
TUBA1B-205ENST00000549870 CC2D2AQ9P2K1 1620 aa24.35■■□□□ 1.49
TUBA1B-205ENST00000549870 CECR2Q9BXF3 1484 aa24.32■■□□□ 1.48
TUBA1B-205ENST00000549870 EIF4G1Q04637 1599 aaKnown RBP24.29■■□□□ 1.48
TUBA1B-205ENST00000549870 MSH5O43196 834 aa24.03■■□□□ 1.44
TUBA1B-205ENST00000549870 NCBP3Q53F19 620 aaKnown RBP24.03■■□□□ 1.44
TUBA1B-205ENST00000549870 EHMT2Q96KQ7 1210 aa23.85■■□□□ 1.41
TUBA1B-205ENST00000549870 NPM3O75607 178 aaKnown RBP23.76■■□□□ 1.39
TUBA1B-205ENST00000549870 SCAF1Q9H7N4 1312 aaKnown RBP23.74■■□□□ 1.39
TUBA1B-205ENST00000549870 SLC4A1APQ9BWU0 796 aaKnown RBP23.71■■□□□ 1.39
TUBA1B-205ENST00000549870 CNKSR2Q8WXI2 1034 aa23.66■■□□□ 1.38
TUBA1B-205ENST00000549870 NCAPD3P42695 1498 aa23.55■■□□□ 1.36
TUBA1B-205ENST00000549870 ATAD2BQ9ULI0 1458 aa23.46■■□□□ 1.35
TUBA1B-205ENST00000549870 DNAJC5Q9H3Z4 198 aa23.4■■□□□ 1.34
TUBA1B-205ENST00000549870 MAPK8IP2Q13387 824 aaPredicted RBP23.39■■□□□ 1.33
TUBA1B-205ENST00000549870 SMARCA4P51532 1647 aa23.37■■□□□ 1.33
TUBA1B-205ENST00000549870 SMARCA2P51531 1590 aa23.35■■□□□ 1.33
TUBA1B-205ENST00000549870 CSRNP3Q8WYN3 585 aa23.34■■□□□ 1.33
TUBA1B-205ENST00000549870 ERCC6Q03468 1493 aa23.3■■□□□ 1.32
TUBA1B-205ENST00000549870 HMGXB3Q12766 1538 aa23.3■■□□□ 1.32
TUBA1B-205ENST00000549870 BAZ1AQ9NRL2 1556 aaPredicted RBP23.27■■□□□ 1.32
TUBA1B-205ENST00000549870 CUX2O14529 1486 aa23.26■■□□□ 1.31
TUBA1B-205ENST00000549870 BAZ1BQ9UIG0 1483 aaKnown RBP23.21■■□□□ 1.31
TUBA1B-205ENST00000549870 NESP48681 1621 aa23.18■■□□□ 1.3
TUBA1B-205ENST00000549870 PEG3Q9GZU2 1588 aa23.14■■□□□ 1.3
TUBA1B-205ENST00000549870 MROH2BQ7Z745 1585 aa23.12■■□□□ 1.29
TUBA1B-205ENST00000549870 RNF216Q9NWF9 866 aaPredicted RBP23.03■■□□□ 1.28
TUBA1B-205ENST00000549870 LAMC3Q9Y6N6 1575 aa22.97■■□□□ 1.27
TUBA1B-205ENST00000549870 DMRT2Q9Y5R5 561 aa22.92■■□□□ 1.26
TUBA1B-205ENST00000549870 PDS5BQ9NTI5 1447 aa22.9■■□□□ 1.26
TUBA1B-205ENST00000549870 ZBTB22O15209 634 aa22.88■■□□□ 1.25
TUBA1B-205ENST00000549870 THOC2Q8NI27 1593 aaKnown RBP22.88■■□□□ 1.25
TUBA1B-205ENST00000549870 CADPSQ9ULU8 1353 aa22.85■■□□□ 1.25
TUBA1B-205ENST00000549870 WIZO95785 1651 aa22.81■■□□□ 1.24
TUBA1B-205ENST00000549870 KIF21AQ7Z4S6 1674 aa22.79■■□□□ 1.24
TUBA1B-205ENST00000549870 HOXD11P31277 338 aaPredicted RBP22.77■■□□□ 1.24
TUBA1B-205ENST00000549870 MRC2Q9UBG0 1479 aa22.66■■□□□ 1.22
TUBA1B-205ENST00000549870 RSF1Q96T23 1441 aaPredicted RBP22.65■■□□□ 1.22
TUBA1B-205ENST00000549870 WDR62O43379 1518 aa22.59■■□□□ 1.21
TUBA1B-205ENST00000549870 FOXD4L1Q9NU39 408 aa22.59■■□□□ 1.21
TUBA1B-205ENST00000549870 CEP164Q9UPV0 1460 aa22.56■■□□□ 1.2
TUBA1B-205ENST00000549870 CFTRP13569 1480 aa22.55■■□□□ 1.2
TUBA1B-205ENST00000549870 FANCD2Q9BXW9 1451 aa22.55■■□□□ 1.2
TUBA1B-205ENST00000549870 TOP2AP11388 1531 aaKnown RBP22.52■■□□□ 1.19
TUBA1B-205ENST00000549870 URB2Q14146 1524 aaKnown RBP22.36■■□□□ 1.17
TUBA1B-205ENST00000549870 TRIM41Q8WV44 630 aa22.34■■□□□ 1.17
TUBA1B-205ENST00000549870 CCDC88BA6NC98 1476 aa22.32■■□□□ 1.16
TUBA1B-205ENST00000549870 OSCARQ8IYS5 282 aa22.29■■□□□ 1.16
TUBA1B-205ENST00000549870 SLC4A2P04920 1241 aa22.28■■□□□ 1.16
TUBA1B-205ENST00000549870 PRDM2Q13029 1718 aa22.17■■□□□ 1.14
TUBA1B-205ENST00000549870 IFT140Q96RY7 1462 aa22.13■■□□□ 1.13
TUBA1B-205ENST00000549870 TOPBP1Q92547 1522 aa22.11■■□□□ 1.13
TUBA1B-205ENST00000549870 ZNF608Q9ULD9 1512 aaPredicted RBP22.11■■□□□ 1.13
TUBA1B-205ENST00000549870 ABCC8Q09428 1581 aa22.08■■□□□ 1.12
TUBA1B-205ENST00000549870 DNMBPQ6XZF7 1577 aa21.99■■□□□ 1.11
TUBA1B-205ENST00000549870 AQRO60306 1485 aaKnown RBP eCLIP21.93■■□□□ 1.19e-17■■■■■ 31.9
TUBA1B-205ENST00000549870 EIF4G3O43432 1585 aaKnown RBP21.91■■□□□ 1.1
TUBA1B-205ENST00000549870 MYCNP04198 464 aaPredicted RBP21.89■■□□□ 1.09
TUBA1B-205ENST00000549870 POLA1P09884 1462 aaPredicted RBP21.89■■□□□ 1.09
TUBA1B-205ENST00000549870 RIMBP3CA6NJZ7 1639 aa21.88■■□□□ 1.09
TUBA1B-205ENST00000549870 RIMBP3BA6NNM3 1639 aa21.88■■□□□ 1.09
TUBA1B-205ENST00000549870 TARBP1Q13395 1621 aaKnown RBP21.88■■□□□ 1.09
TUBA1B-205ENST00000549870 RIMBP3Q9UFD9 1639 aa21.88■■□□□ 1.09
TUBA1B-205ENST00000549870 ARHGEF11O15085 1522 aa21.84■■□□□ 1.09
TUBA1B-205ENST00000549870 RAD54L2Q9Y4B4 1467 aa21.83■■□□□ 1.09
TUBA1B-205ENST00000549870 SOGA1O94964 1423 aa21.83■■□□□ 1.09
TUBA1B-205ENST00000549870 FBLN2P98095 1184 aa21.83■■□□□ 1.09
TUBA1B-205ENST00000549870 TDRD9Q8NDG6 1382 aaKnown RBP21.8■■□□□ 1.08
TUBA1B-205ENST00000549870 CYB5RLQ6IPT4 315 aa21.78■■□□□ 1.08
TUBA1B-205ENST00000549870 ATXN8OSP0DMR3 200 aa21.77■■□□□ 1.08
TUBA1B-205ENST00000549870 DCAF8L1A6NGE4 600 aa21.74■■□□□ 1.07
TUBA1B-205ENST00000549870 FGD5Q6ZNL6 1462 aa21.74■■□□□ 1.07
TUBA1B-205ENST00000549870 CHD1O14646 1710 aa21.74■■□□□ 1.07
TUBA1B-205ENST00000549870 CUX1P39880 1505 aa21.71■■□□□ 1.07
TUBA1B-205ENST00000549870 SUPT5HO00267 1087 aaKnown RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms