Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD248Q9HCU0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD248Q9HCU0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CD248Q9HCU0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CD248Q9HCU0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD248Q9HCU0 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CD248Q9HCU0 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CD248Q9HCU0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD248Q9HCU0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CD248Q9HCU0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD248Q9HCU0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CD248Q9HCU0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD248Q9HCU0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.91■□□□□ 0.62
CD248Q9HCU0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.91■□□□□ 0.62
CD248Q9HCU0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD248Q9HCU0 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD248Q9HCU0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD248Q9HCU0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CD248Q9HCU0 MIR662-201ENST00000384847 95 ntBASIC18.91■□□□□ 0.62
CD248Q9HCU0 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.91■□□□□ 0.62
CD248Q9HCU0 TSSC2-201ENST00000450217 709 ntBASIC18.91■□□□□ 0.62
CD248Q9HCU0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.91■□□□□ 0.62
CD248Q9HCU0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.91■□□□□ 0.62
CD248Q9HCU0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.91■□□□□ 0.62
CD248Q9HCU0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD248Q9HCU0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.91■□□□□ 0.62
CD248Q9HCU0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CD248Q9HCU0 AC112497.1-201ENST00000624824 639 ntBASIC18.91■□□□□ 0.62
CD248Q9HCU0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD248Q9HCU0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CD248Q9HCU0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CD248Q9HCU0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CD248Q9HCU0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CD248Q9HCU0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD248Q9HCU0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.91■□□□□ 0.62
CD248Q9HCU0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CD248Q9HCU0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.91■□□□□ 0.62
CD248Q9HCU0 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD248Q9HCU0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD248Q9HCU0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.91■□□□□ 0.62
CD248Q9HCU0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CD248Q9HCU0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD248Q9HCU0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD248Q9HCU0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CD248Q9HCU0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CD248Q9HCU0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CD248Q9HCU0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CD248Q9HCU0 AL512353.2-201ENST00000448759 1962 ntBASIC18.9■□□□□ 0.62
CD248Q9HCU0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.9■□□□□ 0.62
CD248Q9HCU0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.9■□□□□ 0.62
CD248Q9HCU0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.9■□□□□ 0.62
CD248Q9HCU0 AC026396.1-201ENST00000419388 421 ntBASIC18.9■□□□□ 0.62
CD248Q9HCU0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.9■□□□□ 0.62
CD248Q9HCU0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.9■□□□□ 0.62
CD248Q9HCU0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.9■□□□□ 0.62
CD248Q9HCU0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.9■□□□□ 0.62
CD248Q9HCU0 LINC00896-202ENST00000609602 2128 ntBASIC18.9■□□□□ 0.62
CD248Q9HCU0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.9■□□□□ 0.62
CD248Q9HCU0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.9■□□□□ 0.62
CD248Q9HCU0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CD248Q9HCU0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.9■□□□□ 0.62
CD248Q9HCU0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 ESPNP-201ENST00000270691 2015 ntBASIC18.9■□□□□ 0.62
CD248Q9HCU0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD248Q9HCU0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CD248Q9HCU0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.89■□□□□ 0.62
CD248Q9HCU0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CD248Q9HCU0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
CD248Q9HCU0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CD248Q9HCU0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CD248Q9HCU0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CD248Q9HCU0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CD248Q9HCU0 SIRPAP1-201ENST00000448467 1770 ntBASIC18.89■□□□□ 0.61
CD248Q9HCU0 AL391005.1-201ENST00000623953 2435 ntBASIC18.89■□□□□ 0.61
CD248Q9HCU0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.89■□□□□ 0.61
CD248Q9HCU0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.89■□□□□ 0.61
CD248Q9HCU0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CD248Q9HCU0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms