Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC8Q9BY41 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.83■□□□□ 0.44
HDAC8Q9BY41 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.83■□□□□ 0.44
HDAC8Q9BY41 COX5BP2-201ENST00000392354 334 ntBASIC17.83■□□□□ 0.44
HDAC8Q9BY41 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC8Q9BY41 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.83■□□□□ 0.44
HDAC8Q9BY41 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.83■□□□□ 0.44
HDAC8Q9BY41 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC8Q9BY41 AL773604.1-201ENST00000617417 272 ntBASIC17.83■□□□□ 0.44
HDAC8Q9BY41 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.83■□□□□ 0.44
HDAC8Q9BY41 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC8Q9BY41 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.83■□□□□ 0.44
HDAC8Q9BY41 AC004408.2-201ENST00000623613 2777 ntBASIC17.83■□□□□ 0.44
HDAC8Q9BY41 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
HDAC8Q9BY41 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.83■□□□□ 0.44
HDAC8Q9BY41 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC8Q9BY41 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC8Q9BY41 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC8Q9BY41 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 AC087289.5-201ENST00000586076 3175 ntBASIC17.82■□□□□ 0.44
HDAC8Q9BY41 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 AP000867.4-201ENST00000641616 219 ntBASIC17.82■□□□□ 0.44
HDAC8Q9BY41 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.82■□□□□ 0.44
HDAC8Q9BY41 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.81■□□□□ 0.44
HDAC8Q9BY41 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 RNA5SP419-201ENST00000515908 135 ntBASIC17.81■□□□□ 0.44
HDAC8Q9BY41 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 AC116407.2-201ENST00000613639 860 ntBASIC17.81■□□□□ 0.44
HDAC8Q9BY41 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC8Q9BY41 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.8■□□□□ 0.44
HDAC8Q9BY41 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC8Q9BY41 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC8Q9BY41 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC8Q9BY41 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC8Q9BY41 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC8Q9BY41 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC8Q9BY41 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.8■□□□□ 0.44
HDAC8Q9BY41 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
HDAC8Q9BY41 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC8Q9BY41 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
HDAC8Q9BY41 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC8Q9BY41 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.8■□□□□ 0.44
HDAC8Q9BY41 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.8■□□□□ 0.44
HDAC8Q9BY41 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC8Q9BY41 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC8Q9BY41 AC103564.2-201ENST00000432853 1299 ntBASIC17.8■□□□□ 0.44
HDAC8Q9BY41 AC018712.1-201ENST00000455767 687 ntBASIC17.8■□□□□ 0.44
HDAC8Q9BY41 RNPS1P1-201ENST00000507437 918 ntBASIC17.8■□□□□ 0.44
HDAC8Q9BY41 AC073648.2-201ENST00000510116 352 ntBASIC17.8■□□□□ 0.44
HDAC8Q9BY41 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.8■□□□□ 0.44
HDAC8Q9BY41 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms