Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 RBM17P1-201ENST00000453646 1190 ntBASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 MIR4497-201ENST00000583208 89 ntBASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 AC066615.1-201ENST00000640911 628 ntBASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 AC108860.2-201ENST00000562760 2183 ntBASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 AC036111.1-201ENST00000533973 1582 ntBASIC17.23■□□□□ 0.35
THUMPD3Q9BV44 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 KRT18P55-202ENST00000578578 1546 ntBASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 AC093827.2-201ENST00000512654 315 ntBASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 PP12613-201ENST00000424958 2230 ntBASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
THUMPD3Q9BV44 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 AC141586.5-201ENST00000624546 2050 ntBASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 CA15P1-201ENST00000481698 905 ntBASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 AL355075.4-201ENST00000554988 638 ntBASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THUMPD3Q9BV44 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms