Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 AC091304.2-201ENST00000564639 760 ntBASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 AL732292.2-201ENST00000609649 430 ntBASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 AC114341.1-201ENST00000618070 349 ntBASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 AL691432.3-201ENST00000621860 400 ntBASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCD1Q96GM5 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMARCD1Q96GM5 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
SMARCD1Q96GM5 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SMARCD1Q96GM5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
SMARCD1Q96GM5 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMARCD1Q96GM5 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMARCD1Q96GM5 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMARCD1Q96GM5 KRT16P4-201ENST00000453883 522 ntBASIC18.89■□□□□ 0.61
SMARCD1Q96GM5 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMARCD1Q96GM5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.89■□□□□ 0.61
SMARCD1Q96GM5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.89■□□□□ 0.61
SMARCD1Q96GM5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.89■□□□□ 0.61
SMARCD1Q96GM5 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.89■□□□□ 0.61
SMARCD1Q96GM5 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMARCD1Q96GM5 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SMARCD1Q96GM5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.89■□□□□ 0.61
SMARCD1Q96GM5 TP73-AS1-210ENST00000637775 1455 ntBASIC18.89■□□□□ 0.61
SMARCD1Q96GM5 FLJ13224-201ENST00000313737 1514 ntBASIC18.89■□□□□ 0.61
SMARCD1Q96GM5 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.89■□□□□ 0.61
SMARCD1Q96GM5 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMARCD1Q96GM5 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.89■□□□□ 0.61
SMARCD1Q96GM5 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMARCD1Q96GM5 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 IFNL4P1-201ENST00000607083 540 ntBASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 AP000997.3-201ENST00000623333 2250 ntBASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCD1Q96GM5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 BCL2-203ENST00000589955 5011 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms