Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.38■■□□□ 1.01
DDX11Q96FC9 MIR149-201ENST00000384879 89 ntBASIC21.38■■□□□ 1.01
DDX11Q96FC9 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
DDX11Q96FC9 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DDX11Q96FC9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.38■■□□□ 1.01
DDX11Q96FC9 HLA-F-220ENST00000434407 884 ntBASIC21.38■■□□□ 1.01
DDX11Q96FC9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX11Q96FC9 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DDX11Q96FC9 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
DDX11Q96FC9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
DDX11Q96FC9 PRELID1P1-202ENST00000567272 903 ntBASIC21.38■■□□□ 1.01
DDX11Q96FC9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.38■■□□□ 1.01
DDX11Q96FC9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.38■■□□□ 1.01
DDX11Q96FC9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.38■■□□□ 1.01
DDX11Q96FC9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DDX11Q96FC9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DDX11Q96FC9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX11Q96FC9 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
DDX11Q96FC9 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX11Q96FC9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DDX11Q96FC9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
DDX11Q96FC9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.38■■□□□ 1.01
DDX11Q96FC9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DDX11Q96FC9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.38■■□□□ 1.01
DDX11Q96FC9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
DDX11Q96FC9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX11Q96FC9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX11Q96FC9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DDX11Q96FC9 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DDX11Q96FC9 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DDX11Q96FC9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX11Q96FC9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX11Q96FC9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
DDX11Q96FC9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
DDX11Q96FC9 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX11Q96FC9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
DDX11Q96FC9 AC090340.1-201ENST00000620778 4980 ntBASIC21.37■■□□□ 1.01
DDX11Q96FC9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX11Q96FC9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX11Q96FC9 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DDX11Q96FC9 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX11Q96FC9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.37■■□□□ 1.01
DDX11Q96FC9 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.37■■□□□ 1.01
DDX11Q96FC9 KRT8P26-201ENST00000534154 1276 ntBASIC21.37■■□□□ 1.01
DDX11Q96FC9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.37■■□□□ 1.01
DDX11Q96FC9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX11Q96FC9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
DDX11Q96FC9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
DDX11Q96FC9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX11Q96FC9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX11Q96FC9 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.37■■□□□ 1.01
DDX11Q96FC9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
DDX11Q96FC9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX11Q96FC9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
DDX11Q96FC9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DDX11Q96FC9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
DDX11Q96FC9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX11Q96FC9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX11Q96FC9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX11Q96FC9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX11Q96FC9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX11Q96FC9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.36■■□□□ 1.01
DDX11Q96FC9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX11Q96FC9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX11Q96FC9 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX11Q96FC9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX11Q96FC9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX11Q96FC9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
DDX11Q96FC9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.36■■□□□ 1.01
DDX11Q96FC9 AC104390.1-201ENST00000555663 520 ntBASIC21.36■■□□□ 1.01
DDX11Q96FC9 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.36■■□□□ 1.01
DDX11Q96FC9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.36■■□□□ 1.01
DDX11Q96FC9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX11Q96FC9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX11Q96FC9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX11Q96FC9 AC008764.6-201ENST00000595909 2069 ntBASIC21.36■■□□□ 1.01
DDX11Q96FC9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX11Q96FC9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX11Q96FC9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX11Q96FC9 KRT8P7-201ENST00000533003 1432 ntBASIC21.36■■□□□ 1.01
DDX11Q96FC9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
DDX11Q96FC9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
DDX11Q96FC9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX11Q96FC9 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX11Q96FC9 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.35■■□□□ 1.01
DDX11Q96FC9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
DDX11Q96FC9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.35■■□□□ 1.01
DDX11Q96FC9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX11Q96FC9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX11Q96FC9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX11Q96FC9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX11Q96FC9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.35■■□□□ 1.01
DDX11Q96FC9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX11Q96FC9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DDX11Q96FC9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX11Q96FC9 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX11Q96FC9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.35■■□□□ 1.01
DDX11Q96FC9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX11Q96FC9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.35■■□□□ 1.01
DDX11Q96FC9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms