Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 NSUN5P2-203ENST00000457352 1529 ntBASIC17.37■□□□□ 0.37
RNF31Q96EP0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF31Q96EP0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF31Q96EP0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF31Q96EP0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
RNF31Q96EP0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF31Q96EP0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF31Q96EP0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF31Q96EP0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF31Q96EP0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF31Q96EP0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
RNF31Q96EP0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF31Q96EP0 NUS1P1-201ENST00000446295 882 ntBASIC17.36■□□□□ 0.37
RNF31Q96EP0 FDX1P1-201ENST00000449115 551 ntBASIC17.36■□□□□ 0.37
RNF31Q96EP0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF31Q96EP0 AC090616.6-201ENST00000582640 721 ntBASIC17.36■□□□□ 0.37
RNF31Q96EP0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.36■□□□□ 0.37
RNF31Q96EP0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF31Q96EP0 AC083906.6-201ENST00000641366 219 ntBASIC17.36■□□□□ 0.37
RNF31Q96EP0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RNF31Q96EP0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RNF31Q96EP0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF31Q96EP0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF31Q96EP0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF31Q96EP0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF31Q96EP0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF31Q96EP0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF31Q96EP0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF31Q96EP0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF31Q96EP0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF31Q96EP0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF31Q96EP0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
RNF31Q96EP0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF31Q96EP0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF31Q96EP0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF31Q96EP0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF31Q96EP0 KRT16P4-201ENST00000453883 522 ntBASIC17.35■□□□□ 0.37
RNF31Q96EP0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF31Q96EP0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.35■□□□□ 0.37
RNF31Q96EP0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.35■□□□□ 0.37
RNF31Q96EP0 AL121772.3-201ENST00000610840 674 ntBASIC17.35■□□□□ 0.37
RNF31Q96EP0 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.35■□□□□ 0.37
RNF31Q96EP0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RNF31Q96EP0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.35■□□□□ 0.37
RNF31Q96EP0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF31Q96EP0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF31Q96EP0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF31Q96EP0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF31Q96EP0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RNF31Q96EP0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RNF31Q96EP0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RNF31Q96EP0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF31Q96EP0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF31Q96EP0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF31Q96EP0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF31Q96EP0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF31Q96EP0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF31Q96EP0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF31Q96EP0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF31Q96EP0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF31Q96EP0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF31Q96EP0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF31Q96EP0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF31Q96EP0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RNF31Q96EP0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF31Q96EP0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF31Q96EP0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF31Q96EP0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF31Q96EP0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF31Q96EP0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF31Q96EP0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RNF31Q96EP0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
RNF31Q96EP0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF31Q96EP0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF31Q96EP0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF31Q96EP0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF31Q96EP0 GUSBP12-201ENST00000513727 720 ntBASIC17.34■□□□□ 0.37
RNF31Q96EP0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
RNF31Q96EP0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.34■□□□□ 0.37
RNF31Q96EP0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF31Q96EP0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF31Q96EP0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF31Q96EP0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
RNF31Q96EP0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RNF31Q96EP0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF31Q96EP0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF31Q96EP0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF31Q96EP0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF31Q96EP0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF31Q96EP0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF31Q96EP0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF31Q96EP0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF31Q96EP0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF31Q96EP0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF31Q96EP0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF31Q96EP0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF31Q96EP0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF31Q96EP0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF31Q96EP0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF31Q96EP0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms