Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 AK4P3-201ENST00000418260 669 ntBASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 HLA-F-220ENST00000434407 884 ntBASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 AC079602.3-201ENST00000623931 403 ntBASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TTC9CQ8N5M4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 AC022898.2-201ENST00000616822 1312 ntBASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 SPDYE15P-201ENST00000424157 909 ntBASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 KRT18P55-202ENST00000578578 1546 ntBASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 AC005332.8-201ENST00000622750 2735 ntBASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TTC9CQ8N5M4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 AC132938.6-201ENST00000623828 1655 ntBASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 AC018470.1-201ENST00000624790 3129 ntBASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 KRT18P48-201ENST00000434763 852 ntBASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.23□□□□□ -0.13
TTC9CQ8N5M4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms