Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 AC114341.1-201ENST00000618070 349 ntBASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
GDPD4Q6W3E5 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
GDPD4Q6W3E5 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
GDPD4Q6W3E5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.02■□□□□ 0.47
GDPD4Q6W3E5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.02■□□□□ 0.47
GDPD4Q6W3E5 KRT8P47-201ENST00000604727 1398 ntBASIC18.02■□□□□ 0.47
GDPD4Q6W3E5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.47
GDPD4Q6W3E5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
GDPD4Q6W3E5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 AL020996.1-203ENST00000536896 2307 ntBASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 MIR5100-201ENST00000579544 119 ntBASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
GDPD4Q6W3E5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GDPD4Q6W3E5 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GDPD4Q6W3E5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18■□□□□ 0.47
GDPD4Q6W3E5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18■□□□□ 0.47
GDPD4Q6W3E5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GDPD4Q6W3E5 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18■□□□□ 0.47
GDPD4Q6W3E5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GDPD4Q6W3E5 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GDPD4Q6W3E5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18■□□□□ 0.47
GDPD4Q6W3E5 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18■□□□□ 0.47
GDPD4Q6W3E5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18■□□□□ 0.47
GDPD4Q6W3E5 RCN1P2-201ENST00000398357 915 ntBASIC18■□□□□ 0.47
GDPD4Q6W3E5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18■□□□□ 0.47
GDPD4Q6W3E5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
GDPD4Q6W3E5 TPM4P1-201ENST00000436100 807 ntBASIC18■□□□□ 0.47
GDPD4Q6W3E5 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18■□□□□ 0.47
GDPD4Q6W3E5 RN7SL510P-201ENST00000581311 263 ntBASIC18■□□□□ 0.47
GDPD4Q6W3E5 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18■□□□□ 0.47
GDPD4Q6W3E5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18■□□□□ 0.47
GDPD4Q6W3E5 AL591684.3-201ENST00000605187 298 ntBASIC18■□□□□ 0.47
GDPD4Q6W3E5 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18■□□□□ 0.47
GDPD4Q6W3E5 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18■□□□□ 0.47
GDPD4Q6W3E5 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GDPD4Q6W3E5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
GDPD4Q6W3E5 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GDPD4Q6W3E5 BICD1-207ENST00000551848 1962 ntBASIC18■□□□□ 0.47
GDPD4Q6W3E5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GDPD4Q6W3E5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GDPD4Q6W3E5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GDPD4Q6W3E5 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
GDPD4Q6W3E5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
GDPD4Q6W3E5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
GDPD4Q6W3E5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms