Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 TSPY21P-201ENST00000433481 731 ntBASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 KRT18P5-201ENST00000436075 1291 ntBASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 ANKRD20A6P-201ENST00000618763 204 ntBASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.98□□□□□ -0.17
KCNIP4Q6PIL6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 MCRIP2P1-201ENST00000394346 511 ntBASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
KCNIP4Q6PIL6 AL138688.1-201ENST00000624851 1594 ntBASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 AL096828.2-201ENST00000567259 1965 ntBASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 MTMR9LP-203ENST00000426597 1545 ntBASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms