Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 CHCHD2P8-201ENST00000429873 447 ntBASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 TSSC2-201ENST00000450217 709 ntBASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 GUSBP12-201ENST00000513727 720 ntBASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PPP4R3AQ6IN85 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PPP4R3AQ6IN85 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PPP4R3AQ6IN85 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PPP4R3AQ6IN85 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.44■□□□□ 0.86
PPP4R3AQ6IN85 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPP4R3AQ6IN85 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPP4R3AQ6IN85 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPP4R3AQ6IN85 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.44■□□□□ 0.86
PPP4R3AQ6IN85 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPP4R3AQ6IN85 AL353801.3-201ENST00000609898 542 ntBASIC20.44■□□□□ 0.86
PPP4R3AQ6IN85 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PPP4R3AQ6IN85 AP000997.3-201ENST00000623333 2250 ntBASIC20.44■□□□□ 0.86
PPP4R3AQ6IN85 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PPP4R3AQ6IN85 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PPP4R3AQ6IN85 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPP4R3AQ6IN85 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPP4R3AQ6IN85 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPP4R3AQ6IN85 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPP4R3AQ6IN85 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.44■□□□□ 0.86
PPP4R3AQ6IN85 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPP4R3AQ6IN85 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PPP4R3AQ6IN85 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPP4R3AQ6IN85 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 AC069148.1-201ENST00000608741 768 ntBASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.43■□□□□ 0.86
PPP4R3AQ6IN85 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.42■□□□□ 0.86
PPP4R3AQ6IN85 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R3AQ6IN85 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R3AQ6IN85 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.42■□□□□ 0.86
PPP4R3AQ6IN85 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R3AQ6IN85 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R3AQ6IN85 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.42■□□□□ 0.86
PPP4R3AQ6IN85 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R3AQ6IN85 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
PPP4R3AQ6IN85 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R3AQ6IN85 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R3AQ6IN85 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PPP4R3AQ6IN85 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
PPP4R3AQ6IN85 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R3AQ6IN85 AP002383.4-201ENST00000442518 975 ntBASIC20.42■□□□□ 0.86
PPP4R3AQ6IN85 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R3AQ6IN85 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.42■□□□□ 0.86
PPP4R3AQ6IN85 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R3AQ6IN85 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.42■□□□□ 0.86
PPP4R3AQ6IN85 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R3AQ6IN85 AL592071.1-201ENST00000611956 408 ntBASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms