Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATPAF1Q5TC12 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATPAF1Q5TC12 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 REXO1L9P-201ENST00000604264 2108 ntBASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 ECEL1P2-202ENST00000465689 757 ntBASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 MIR4674-201ENST00000582457 87 ntBASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 LINC01023-201ENST00000606054 436 ntBASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF1Q5TC12 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 MIR3180-5-201ENST00000583743 153 ntBASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF1Q5TC12 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 MIR564-202ENST00000385049 94 ntBASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 MYC-208ENST00000641036 567 ntBASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms