Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 FAAHP1-202ENST00000446499 1238 ntBASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 SDHAP2-201ENST00000455183 2001 ntBASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 AP005901.3-202ENST00000581653 237 ntBASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 PKD1P1-201ENST00000458669 6805 ntBASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 AP000997.3-201ENST00000623333 2250 ntBASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.5■□□□□ 0.39
SNAP47Q5SQN1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 KRT8P10-201ENST00000450021 1447 ntBASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 TSPY12P-201ENST00000421279 868 ntBASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 IGHV3-47-201ENST00000425060 335 ntBASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 AL031008.1-201ENST00000619963 541 ntBASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNAP47Q5SQN1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SNAP47Q5SQN1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNAP47Q5SQN1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNAP47Q5SQN1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms