Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCL20P78556 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.19□□□□□ -0.14
CCL20P78556 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCL20P78556 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL20P78556 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL20P78556 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL20P78556 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL20P78556 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL20P78556 KRT8P11-201ENST00000409686 1436 ntBASIC14.19□□□□□ -0.14
CCL20P78556 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL20P78556 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CCL20P78556 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL20P78556 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
CCL20P78556 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
CCL20P78556 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL20P78556 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.19□□□□□ -0.14
CCL20P78556 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL20P78556 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CCL20P78556 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL20P78556 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL20P78556 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL20P78556 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCL20P78556 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL20P78556 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL20P78556 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL20P78556 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
CCL20P78556 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCL20P78556 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL20P78556 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCL20P78556 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CCL20P78556 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.18□□□□□ -0.14
CCL20P78556 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.18□□□□□ -0.14
CCL20P78556 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.18□□□□□ -0.14
CCL20P78556 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CCL20P78556 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC14.18□□□□□ -0.14
CCL20P78556 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.18□□□□□ -0.14
CCL20P78556 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCL20P78556 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL20P78556 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC14.18□□□□□ -0.14
CCL20P78556 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CCL20P78556 NTF6G-201ENST00000591094 616 ntBASIC14.18□□□□□ -0.14
CCL20P78556 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCL20P78556 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.18□□□□□ -0.14
CCL20P78556 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL20P78556 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL20P78556 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL20P78556 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL20P78556 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL20P78556 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL20P78556 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL20P78556 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL20P78556 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL20P78556 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL20P78556 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL20P78556 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCL20P78556 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.17□□□□□ -0.14
CCL20P78556 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.17□□□□□ -0.14
CCL20P78556 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCL20P78556 AC007950.2-201ENST00000615045 2347 ntBASIC14.17□□□□□ -0.14
CCL20P78556 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL20P78556 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL20P78556 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.17□□□□□ -0.14
CCL20P78556 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL20P78556 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL20P78556 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL20P78556 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.17□□□□□ -0.14
CCL20P78556 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.17□□□□□ -0.14
CCL20P78556 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.17□□□□□ -0.14
CCL20P78556 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
CCL20P78556 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL20P78556 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL20P78556 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL20P78556 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL20P78556 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL20P78556 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL20P78556 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL20P78556 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms