Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
UBE2NP61088 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBE2NP61088 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBE2NP61088 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.83■□□□□ 0.13
UBE2NP61088 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.83■□□□□ 0.13
UBE2NP61088 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
UBE2NP61088 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
UBE2NP61088 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
UBE2NP61088 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
UBE2NP61088 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
UBE2NP61088 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
UBE2NP61088 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBE2NP61088 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.83■□□□□ 0.12
UBE2NP61088 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBE2NP61088 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBE2NP61088 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBE2NP61088 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBE2NP61088 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
UBE2NP61088 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBE2NP61088 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.83■□□□□ 0.12
UBE2NP61088 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.83■□□□□ 0.12
UBE2NP61088 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.83■□□□□ 0.12
UBE2NP61088 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.83■□□□□ 0.12
UBE2NP61088 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
UBE2NP61088 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.83■□□□□ 0.12
UBE2NP61088 KRT18P1-202ENST00000452408 1331 ntBASIC15.83■□□□□ 0.12
UBE2NP61088 AC016734.2-201ENST00000624325 1377 ntBASIC15.83■□□□□ 0.12
UBE2NP61088 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
UBE2NP61088 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBE2NP61088 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
UBE2NP61088 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBE2NP61088 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.83■□□□□ 0.12
UBE2NP61088 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBE2NP61088 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.83■□□□□ 0.12
UBE2NP61088 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
UBE2NP61088 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBE2NP61088 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2NP61088 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2NP61088 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2NP61088 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.82■□□□□ 0.12
UBE2NP61088 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2NP61088 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
UBE2NP61088 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
UBE2NP61088 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2NP61088 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2NP61088 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2NP61088 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2NP61088 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2NP61088 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2NP61088 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2NP61088 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.82■□□□□ 0.12
UBE2NP61088 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.82■□□□□ 0.12
UBE2NP61088 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2NP61088 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2NP61088 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.82■□□□□ 0.12
UBE2NP61088 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.82■□□□□ 0.12
UBE2NP61088 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2NP61088 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2NP61088 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2NP61088 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2NP61088 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.82■□□□□ 0.12
UBE2NP61088 PHGDH-209ENST00000641074 1780 ntBASIC15.82■□□□□ 0.12
UBE2NP61088 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2NP61088 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2NP61088 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2NP61088 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
UBE2NP61088 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2NP61088 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2NP61088 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2NP61088 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2NP61088 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2NP61088 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2NP61088 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2NP61088 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
UBE2NP61088 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2NP61088 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
UBE2NP61088 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2NP61088 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2NP61088 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.81■□□□□ 0.12
UBE2NP61088 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2NP61088 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2NP61088 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2NP61088 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2NP61088 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2NP61088 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.81■□□□□ 0.12
UBE2NP61088 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2NP61088 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.81■□□□□ 0.12
UBE2NP61088 VENTXP7-201ENST00000475503 772 ntBASIC15.81■□□□□ 0.12
UBE2NP61088 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.81■□□□□ 0.12
UBE2NP61088 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
UBE2NP61088 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
UBE2NP61088 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.81■□□□□ 0.12
UBE2NP61088 AC124864.1-201ENST00000623408 392 ntBASIC15.81■□□□□ 0.12
UBE2NP61088 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.81■□□□□ 0.12
UBE2NP61088 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2NP61088 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2NP61088 AC104581.1-202ENST00000635932 2618 ntBASIC15.81■□□□□ 0.12
UBE2NP61088 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.8■□□□□ 0.12
UBE2NP61088 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.8■□□□□ 0.12
UBE2NP61088 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms