Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERVFC1P60507 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ERVFC1P60507 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERVFC1P60507 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.87■□□□□ 0.61
ERVFC1P60507 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ERVFC1P60507 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERVFC1P60507 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.87■□□□□ 0.61
ERVFC1P60507 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERVFC1P60507 AL596442.2-201ENST00000610240 980 ntBASIC18.87■□□□□ 0.61
ERVFC1P60507 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ERVFC1P60507 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ERVFC1P60507 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.87■□□□□ 0.61
ERVFC1P60507 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ERVFC1P60507 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.87■□□□□ 0.61
ERVFC1P60507 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ERVFC1P60507 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.86■□□□□ 0.61
ERVFC1P60507 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERVFC1P60507 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERVFC1P60507 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
ERVFC1P60507 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERVFC1P60507 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERVFC1P60507 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERVFC1P60507 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.86■□□□□ 0.61
ERVFC1P60507 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERVFC1P60507 KRT8P47-201ENST00000604727 1398 ntBASIC18.86■□□□□ 0.61
ERVFC1P60507 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERVFC1P60507 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.86■□□□□ 0.61
ERVFC1P60507 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERVFC1P60507 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ERVFC1P60507 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.86■□□□□ 0.61
ERVFC1P60507 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERVFC1P60507 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.86■□□□□ 0.61
ERVFC1P60507 MCCD1P2-201ENST00000423228 335 ntBASIC18.86■□□□□ 0.61
ERVFC1P60507 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.86■□□□□ 0.61
ERVFC1P60507 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.86■□□□□ 0.61
ERVFC1P60507 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.86■□□□□ 0.61
ERVFC1P60507 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.86■□□□□ 0.61
ERVFC1P60507 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.86■□□□□ 0.61
ERVFC1P60507 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.86■□□□□ 0.61
ERVFC1P60507 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.86■□□□□ 0.61
ERVFC1P60507 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.86■□□□□ 0.61
ERVFC1P60507 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.86■□□□□ 0.61
ERVFC1P60507 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERVFC1P60507 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERVFC1P60507 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERVFC1P60507 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ERVFC1P60507 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ERVFC1P60507 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.85■□□□□ 0.61
ERVFC1P60507 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERVFC1P60507 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
ERVFC1P60507 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ERVFC1P60507 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERVFC1P60507 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.85■□□□□ 0.61
ERVFC1P60507 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.85■□□□□ 0.61
ERVFC1P60507 AP006288.1-201ENST00000446065 395 ntBASIC18.85■□□□□ 0.61
ERVFC1P60507 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
ERVFC1P60507 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.85■□□□□ 0.61
ERVFC1P60507 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.85■□□□□ 0.61
ERVFC1P60507 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
ERVFC1P60507 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.85■□□□□ 0.61
ERVFC1P60507 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.85■□□□□ 0.61
ERVFC1P60507 AC005829.1-201ENST00000570002 483 ntBASIC18.85■□□□□ 0.61
ERVFC1P60507 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.85■□□□□ 0.61
ERVFC1P60507 AC073592.5-201ENST00000624854 528 ntBASIC18.85■□□□□ 0.61
ERVFC1P60507 AC092865.6-201ENST00000642101 219 ntBASIC18.85■□□□□ 0.61
ERVFC1P60507 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERVFC1P60507 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERVFC1P60507 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERVFC1P60507 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
ERVFC1P60507 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ERVFC1P60507 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.84■□□□□ 0.61
ERVFC1P60507 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERVFC1P60507 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ERVFC1P60507 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ERVFC1P60507 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ERVFC1P60507 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ERVFC1P60507 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ERVFC1P60507 KRT18P28-201ENST00000453838 1332 ntBASIC18.84■□□□□ 0.61
ERVFC1P60507 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
ERVFC1P60507 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERVFC1P60507 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ERVFC1P60507 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERVFC1P60507 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.84■□□□□ 0.61
ERVFC1P60507 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.84■□□□□ 0.61
ERVFC1P60507 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.84■□□□□ 0.61
ERVFC1P60507 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ERVFC1P60507 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
ERVFC1P60507 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.84■□□□□ 0.61
ERVFC1P60507 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.84■□□□□ 0.61
ERVFC1P60507 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ERVFC1P60507 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.84■□□□□ 0.61
ERVFC1P60507 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
ERVFC1P60507 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.84■□□□□ 0.61
ERVFC1P60507 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERVFC1P60507 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERVFC1P60507 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERVFC1P60507 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.84■□□□□ 0.61
ERVFC1P60507 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERVFC1P60507 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.84■□□□□ 0.61
ERVFC1P60507 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms