Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.51■□□□□ 0.87
CLCN1P35523 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.51■□□□□ 0.87
CLCN1P35523 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.51■□□□□ 0.87
CLCN1P35523 ITM2C-210ENST00000620962 501 ntBASIC20.51■□□□□ 0.87
CLCN1P35523 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLCN1P35523 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCN1P35523 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.51■□□□□ 0.87
CLCN1P35523 AC026691.1-201ENST00000602502 2017 ntBASIC20.51■□□□□ 0.87
CLCN1P35523 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCN1P35523 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCN1P35523 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.51■□□□□ 0.87
CLCN1P35523 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLCN1P35523 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.51■□□□□ 0.87
CLCN1P35523 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCN1P35523 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
CLCN1P35523 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLCN1P35523 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CLCN1P35523 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCN1P35523 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLCN1P35523 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCN1P35523 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLCN1P35523 KRT8P41-201ENST00000533985 1514 ntBASIC20.5■□□□□ 0.87
CLCN1P35523 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.5■□□□□ 0.87
CLCN1P35523 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CLCN1P35523 FAM201B-201ENST00000458407 597 ntBASIC20.5■□□□□ 0.87
CLCN1P35523 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CLCN1P35523 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.5■□□□□ 0.87
CLCN1P35523 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCN1P35523 AIRN-201ENST00000601203 4374 ntBASIC20.5■□□□□ 0.87
CLCN1P35523 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCN1P35523 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.5■□□□□ 0.87
CLCN1P35523 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLCN1P35523 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCN1P35523 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CLCN1P35523 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLCN1P35523 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCN1P35523 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLCN1P35523 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLCN1P35523 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.49■□□□□ 0.87
CLCN1P35523 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCN1P35523 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.49■□□□□ 0.87
CLCN1P35523 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLCN1P35523 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCN1P35523 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCN1P35523 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.49■□□□□ 0.87
CLCN1P35523 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CLCN1P35523 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLCN1P35523 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CLCN1P35523 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.49■□□□□ 0.87
CLCN1P35523 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.49■□□□□ 0.87
CLCN1P35523 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCN1P35523 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.49■□□□□ 0.87
CLCN1P35523 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.49■□□□□ 0.87
CLCN1P35523 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CLCN1P35523 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CLCN1P35523 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.49■□□□□ 0.87
CLCN1P35523 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLCN1P35523 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCN1P35523 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCN1P35523 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.49■□□□□ 0.87
CLCN1P35523 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCN1P35523 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCN1P35523 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLCN1P35523 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.49■□□□□ 0.87
CLCN1P35523 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLCN1P35523 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.49■□□□□ 0.87
CLCN1P35523 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLCN1P35523 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCN1P35523 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCN1P35523 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLCN1P35523 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CLCN1P35523 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLCN1P35523 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.48■□□□□ 0.87
CLCN1P35523 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLCN1P35523 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCN1P35523 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CLCN1P35523 AL359736.2-201ENST00000621992 437 ntBASIC20.48■□□□□ 0.87
CLCN1P35523 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLCN1P35523 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.48■□□□□ 0.87
CLCN1P35523 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCN1P35523 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLCN1P35523 HTR7P1-201ENST00000538670 1336 ntBASIC20.48■□□□□ 0.87
CLCN1P35523 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC20.48■□□□□ 0.87
CLCN1P35523 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CLCN1P35523 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CLCN1P35523 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN1P35523 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.47■□□□□ 0.87
CLCN1P35523 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.47■□□□□ 0.87
CLCN1P35523 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN1P35523 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN1P35523 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN1P35523 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN1P35523 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.47■□□□□ 0.87
CLCN1P35523 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN1P35523 PRORSD1P-201ENST00000295112 541 ntBASIC20.47■□□□□ 0.87
CLCN1P35523 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.47■□□□□ 0.87
CLCN1P35523 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN1P35523 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN1P35523 Z85996.1-201ENST00000494644 937 ntBASIC20.47■□□□□ 0.87
CLCN1P35523 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms