Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC8P31273 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC8P31273 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.53■□□□□ 0.72
HOXC8P31273 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC8P31273 SIRPAP1-201ENST00000448467 1770 ntBASIC19.53■□□□□ 0.72
HOXC8P31273 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC8P31273 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC8P31273 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HOXC8P31273 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.53■□□□□ 0.72
HOXC8P31273 AC004832.2-201ENST00000426397 482 ntBASIC19.53■□□□□ 0.72
HOXC8P31273 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.53■□□□□ 0.72
HOXC8P31273 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.53■□□□□ 0.72
HOXC8P31273 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.53■□□□□ 0.72
HOXC8P31273 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HOXC8P31273 AC148477.5-201ENST00000625164 1645 ntBASIC19.53■□□□□ 0.72
HOXC8P31273 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC8P31273 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC8P31273 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC8P31273 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC8P31273 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC8P31273 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HOXC8P31273 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC8P31273 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
HOXC8P31273 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC8P31273 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.53■□□□□ 0.72
HOXC8P31273 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC8P31273 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC8P31273 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
HOXC8P31273 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.52■□□□□ 0.72
HOXC8P31273 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC8P31273 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC8P31273 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
HOXC8P31273 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.52■□□□□ 0.72
HOXC8P31273 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.52■□□□□ 0.72
HOXC8P31273 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.52■□□□□ 0.72
HOXC8P31273 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
HOXC8P31273 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.52■□□□□ 0.72
HOXC8P31273 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC8P31273 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.52■□□□□ 0.72
HOXC8P31273 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC8P31273 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC8P31273 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HOXC8P31273 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC8P31273 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC8P31273 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC8P31273 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC8P31273 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC8P31273 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.51■□□□□ 0.71
HOXC8P31273 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC8P31273 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC8P31273 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC8P31273 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
HOXC8P31273 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.51■□□□□ 0.71
HOXC8P31273 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.51■□□□□ 0.71
HOXC8P31273 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.51■□□□□ 0.71
HOXC8P31273 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.51■□□□□ 0.71
HOXC8P31273 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.51■□□□□ 0.71
HOXC8P31273 RNA5SP416-201ENST00000516838 111 ntBASIC19.51■□□□□ 0.71
HOXC8P31273 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.51■□□□□ 0.71
HOXC8P31273 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.51■□□□□ 0.71
HOXC8P31273 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
HOXC8P31273 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.51■□□□□ 0.71
HOXC8P31273 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.51■□□□□ 0.71
HOXC8P31273 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.51■□□□□ 0.71
HOXC8P31273 MIR1199-201ENST00000621445 119 ntBASIC19.51■□□□□ 0.71
HOXC8P31273 AC005593.1-201ENST00000624894 515 ntBASIC19.51■□□□□ 0.71
HOXC8P31273 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.51■□□□□ 0.71
HOXC8P31273 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
HOXC8P31273 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC8P31273 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC8P31273 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
HOXC8P31273 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC8P31273 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
HOXC8P31273 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.5■□□□□ 0.71
HOXC8P31273 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC8P31273 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HOXC8P31273 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.5■□□□□ 0.71
HOXC8P31273 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC8P31273 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC8P31273 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC8P31273 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC8P31273 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC8P31273 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.5■□□□□ 0.71
HOXC8P31273 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HOXC8P31273 AC007967.2-201ENST00000432613 625 ntBASIC19.5■□□□□ 0.71
HOXC8P31273 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC8P31273 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.5■□□□□ 0.71
HOXC8P31273 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
HOXC8P31273 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.5■□□□□ 0.71
HOXC8P31273 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC8P31273 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC8P31273 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC8P31273 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
HOXC8P31273 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.5■□□□□ 0.71
HOXC8P31273 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.5■□□□□ 0.71
HOXC8P31273 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
HOXC8P31273 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC8P31273 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.49■□□□□ 0.71
HOXC8P31273 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC8P31273 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms