Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.53■□□□□ 0.56
BRAFP15056 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRAFP15056 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRAFP15056 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRAFP15056 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRAFP15056 AC141586.5-201ENST00000624546 2050 ntBASIC18.53■□□□□ 0.56
BRAFP15056 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRAFP15056 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
BRAFP15056 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRAFP15056 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRAFP15056 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRAFP15056 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRAFP15056 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.53■□□□□ 0.56
BRAFP15056 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
BRAFP15056 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRAFP15056 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.53■□□□□ 0.56
BRAFP15056 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.53■□□□□ 0.56
BRAFP15056 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.53■□□□□ 0.56
BRAFP15056 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.53■□□□□ 0.56
BRAFP15056 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.53■□□□□ 0.56
BRAFP15056 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
BRAFP15056 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.53■□□□□ 0.56
BRAFP15056 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
BRAFP15056 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.53■□□□□ 0.56
BRAFP15056 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRAFP15056 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRAFP15056 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRAFP15056 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.53■□□□□ 0.56
BRAFP15056 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRAFP15056 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRAFP15056 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BRAFP15056 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRAFP15056 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRAFP15056 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRAFP15056 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BRAFP15056 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
BRAFP15056 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BRAFP15056 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
BRAFP15056 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRAFP15056 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRAFP15056 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.52■□□□□ 0.56
BRAFP15056 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.52■□□□□ 0.56
BRAFP15056 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRAFP15056 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
BRAFP15056 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRAFP15056 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
BRAFP15056 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BRAFP15056 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRAFP15056 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BRAFP15056 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
BRAFP15056 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.52■□□□□ 0.55
BRAFP15056 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.52■□□□□ 0.55
BRAFP15056 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
BRAFP15056 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
BRAFP15056 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
BRAFP15056 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
BRAFP15056 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.52■□□□□ 0.55
BRAFP15056 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
BRAFP15056 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
BRAFP15056 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
BRAFP15056 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
BRAFP15056 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
BRAFP15056 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRAFP15056 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.51■□□□□ 0.55
BRAFP15056 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
BRAFP15056 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRAFP15056 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRAFP15056 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.51■□□□□ 0.55
BRAFP15056 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRAFP15056 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.51■□□□□ 0.55
BRAFP15056 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.51■□□□□ 0.55
BRAFP15056 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.51■□□□□ 0.55
BRAFP15056 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.51■□□□□ 0.55
BRAFP15056 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.51■□□□□ 0.55
BRAFP15056 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRAFP15056 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.51■□□□□ 0.55
BRAFP15056 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
BRAFP15056 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.51■□□□□ 0.55
BRAFP15056 AC008622.2-201ENST00000617006 1229 ntBASIC18.51■□□□□ 0.55
BRAFP15056 AL138966.2-201ENST00000621997 464 ntBASIC18.51■□□□□ 0.55
BRAFP15056 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.51■□□□□ 0.55
BRAFP15056 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRAFP15056 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.51■□□□□ 0.55
BRAFP15056 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
BRAFP15056 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRAFP15056 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
BRAFP15056 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BRAFP15056 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRAFP15056 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRAFP15056 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.51■□□□□ 0.55
BRAFP15056 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRAFP15056 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BRAFP15056 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BRAFP15056 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BRAFP15056 AD000864.1-201ENST00000624076 2295 ntBASIC18.51■□□□□ 0.55
BRAFP15056 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.51■□□□□ 0.55
BRAFP15056 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRAFP15056 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRAFP15056 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.5■□□□□ 0.55
BRAFP15056 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms