Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GGPS1O95749 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.17■□□□□ 0.82
GGPS1O95749 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.17■□□□□ 0.82
GGPS1O95749 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GGPS1O95749 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.17■□□□□ 0.82
GGPS1O95749 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GGPS1O95749 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
GGPS1O95749 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GGPS1O95749 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GGPS1O95749 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GGPS1O95749 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GGPS1O95749 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GGPS1O95749 PHGDH-209ENST00000641074 1780 ntBASIC20.16■□□□□ 0.82
GGPS1O95749 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GGPS1O95749 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GGPS1O95749 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GGPS1O95749 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.16■□□□□ 0.82
GGPS1O95749 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
GGPS1O95749 RBM17P3-201ENST00000417687 1192 ntBASIC20.16■□□□□ 0.82
GGPS1O95749 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GGPS1O95749 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
GGPS1O95749 AF186996.4-201ENST00000467186 377 ntBASIC20.16■□□□□ 0.82
GGPS1O95749 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GGPS1O95749 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.16■□□□□ 0.82
GGPS1O95749 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
GGPS1O95749 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GGPS1O95749 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GGPS1O95749 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GGPS1O95749 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GGPS1O95749 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GGPS1O95749 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
GGPS1O95749 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.16■□□□□ 0.82
GGPS1O95749 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GGPS1O95749 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
GGPS1O95749 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GGPS1O95749 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GGPS1O95749 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GGPS1O95749 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.15■□□□□ 0.82
GGPS1O95749 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
GGPS1O95749 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GGPS1O95749 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GGPS1O95749 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.15■□□□□ 0.82
GGPS1O95749 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.15■□□□□ 0.82
GGPS1O95749 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.15■□□□□ 0.82
GGPS1O95749 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GGPS1O95749 AC120114.3-201ENST00000611923 658 ntBASIC20.15■□□□□ 0.82
GGPS1O95749 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.15■□□□□ 0.82
GGPS1O95749 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
GGPS1O95749 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
GGPS1O95749 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.15■□□□□ 0.82
GGPS1O95749 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GGPS1O95749 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
GGPS1O95749 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
GGPS1O95749 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
GGPS1O95749 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
GGPS1O95749 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GGPS1O95749 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
GGPS1O95749 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
GGPS1O95749 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GGPS1O95749 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GGPS1O95749 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.15■□□□□ 0.82
GGPS1O95749 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GGPS1O95749 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
GGPS1O95749 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
GGPS1O95749 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
GGPS1O95749 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
GGPS1O95749 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
GGPS1O95749 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.14■□□□□ 0.81
GGPS1O95749 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GGPS1O95749 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GGPS1O95749 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GGPS1O95749 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.14■□□□□ 0.81
GGPS1O95749 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
GGPS1O95749 AL031284.1-201ENST00000419297 478 ntBASIC20.14■□□□□ 0.81
GGPS1O95749 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.14■□□□□ 0.81
GGPS1O95749 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
GGPS1O95749 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.14■□□□□ 0.81
GGPS1O95749 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.14■□□□□ 0.81
GGPS1O95749 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.14■□□□□ 0.81
GGPS1O95749 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
GGPS1O95749 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GGPS1O95749 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.14■□□□□ 0.81
GGPS1O95749 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GGPS1O95749 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
GGPS1O95749 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.14■□□□□ 0.81
GGPS1O95749 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GGPS1O95749 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GGPS1O95749 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GGPS1O95749 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.13■□□□□ 0.81
GGPS1O95749 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GGPS1O95749 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GGPS1O95749 AC093010.1-201ENST00000473625 1624 ntBASIC20.13■□□□□ 0.81
GGPS1O95749 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GGPS1O95749 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
GGPS1O95749 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GGPS1O95749 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
GGPS1O95749 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
GGPS1O95749 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GGPS1O95749 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
GGPS1O95749 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms