Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SCAF4O95104 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SCAF4O95104 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SCAF4O95104 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
SCAF4O95104 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.79□□□□□ -0.04
SCAF4O95104 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SCAF4O95104 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.79□□□□□ -0.04
SCAF4O95104 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SCAF4O95104 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SCAF4O95104 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.79□□□□□ -0.04
SCAF4O95104 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SCAF4O95104 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SCAF4O95104 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.79□□□□□ -0.04
SCAF4O95104 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.79□□□□□ -0.04
SCAF4O95104 FLJ16779-201ENST00000612722 7638 ntBASIC14.79□□□□□ -0.04
SCAF4O95104 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SCAF4O95104 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SCAF4O95104 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SCAF4O95104 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SCAF4O95104 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SCAF4O95104 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SCAF4O95104 NKILA-202ENST00000614771 2598 ntBASIC14.79□□□□□ -0.04
SCAF4O95104 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCAF4O95104 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.78□□□□□ -0.04
SCAF4O95104 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SCAF4O95104 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
SCAF4O95104 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCAF4O95104 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SCAF4O95104 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SCAF4O95104 AL357033.4-201ENST00000617703 1807 ntBASIC14.78□□□□□ -0.04
SCAF4O95104 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCAF4O95104 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCAF4O95104 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
SCAF4O95104 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCAF4O95104 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCAF4O95104 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SCAF4O95104 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCAF4O95104 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.78□□□□□ -0.04
SCAF4O95104 AC133681.1-201ENST00000465482 601 ntBASIC14.78□□□□□ -0.04
SCAF4O95104 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SCAF4O95104 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.78□□□□□ -0.04
SCAF4O95104 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.78□□□□□ -0.04
SCAF4O95104 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.78□□□□□ -0.04
SCAF4O95104 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.78□□□□□ -0.04
SCAF4O95104 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCAF4O95104 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SCAF4O95104 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SCAF4O95104 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
SCAF4O95104 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCAF4O95104 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.78□□□□□ -0.04
SCAF4O95104 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCAF4O95104 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCAF4O95104 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCAF4O95104 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCAF4O95104 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SCAF4O95104 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.78□□□□□ -0.04
SCAF4O95104 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCAF4O95104 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCAF4O95104 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCAF4O95104 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SCAF4O95104 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SCAF4O95104 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCAF4O95104 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SCAF4O95104 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.77□□□□□ -0.04
SCAF4O95104 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCAF4O95104 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SCAF4O95104 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SCAF4O95104 KRT8P41-201ENST00000533985 1514 ntBASIC14.77□□□□□ -0.04
SCAF4O95104 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCAF4O95104 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SCAF4O95104 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCAF4O95104 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SCAF4O95104 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SCAF4O95104 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SCAF4O95104 HTR7P1-201ENST00000538670 1336 ntBASIC14.77□□□□□ -0.04
SCAF4O95104 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.77□□□□□ -0.04
SCAF4O95104 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SCAF4O95104 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCAF4O95104 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCAF4O95104 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCAF4O95104 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.77□□□□□ -0.05
SCAF4O95104 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.77□□□□□ -0.05
SCAF4O95104 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.77□□□□□ -0.05
SCAF4O95104 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.77□□□□□ -0.05
SCAF4O95104 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.77□□□□□ -0.05
SCAF4O95104 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.77□□□□□ -0.05
SCAF4O95104 AP006294.2-201ENST00000641667 209 ntBASIC14.77□□□□□ -0.05
SCAF4O95104 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
SCAF4O95104 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
SCAF4O95104 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCAF4O95104 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
SCAF4O95104 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SCAF4O95104 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCAF4O95104 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SCAF4O95104 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SCAF4O95104 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCAF4O95104 AL118508.1-201ENST00000613502 2345 ntBASIC14.77□□□□□ -0.05
SCAF4O95104 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SCAF4O95104 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
SCAF4O95104 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms