Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 AC083849.1-201ENST00000615227 514 ntBASIC18.75■□□□□ 0.59
LRCH4O75427 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.75■□□□□ 0.59
LRCH4O75427 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH4O75427 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
LRCH4O75427 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
LRCH4O75427 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.75■□□□□ 0.59
LRCH4O75427 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH4O75427 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH4O75427 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH4O75427 LINC01311-201ENST00000565162 1445 ntBASIC18.74■□□□□ 0.59
LRCH4O75427 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.74■□□□□ 0.59
LRCH4O75427 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.74■□□□□ 0.59
LRCH4O75427 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.74■□□□□ 0.59
LRCH4O75427 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH4O75427 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH4O75427 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
LRCH4O75427 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH4O75427 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
LRCH4O75427 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH4O75427 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH4O75427 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH4O75427 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH4O75427 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LRCH4O75427 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.74■□□□□ 0.59
LRCH4O75427 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.74■□□□□ 0.59
LRCH4O75427 AP003733.1-201ENST00000491725 852 ntBASIC18.74■□□□□ 0.59
LRCH4O75427 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.74■□□□□ 0.59
LRCH4O75427 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.74■□□□□ 0.59
LRCH4O75427 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.74■□□□□ 0.59
LRCH4O75427 ZNF444P1-201ENST00000559497 298 ntBASIC18.74■□□□□ 0.59
LRCH4O75427 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.74■□□□□ 0.59
LRCH4O75427 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.74■□□□□ 0.59
LRCH4O75427 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.74■□□□□ 0.59
LRCH4O75427 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.74■□□□□ 0.59
LRCH4O75427 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.74■□□□□ 0.59
LRCH4O75427 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH4O75427 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH4O75427 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH4O75427 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LRCH4O75427 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH4O75427 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH4O75427 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH4O75427 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.74■□□□□ 0.59
LRCH4O75427 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH4O75427 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH4O75427 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LRCH4O75427 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.73■□□□□ 0.59
LRCH4O75427 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH4O75427 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH4O75427 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH4O75427 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH4O75427 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH4O75427 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH4O75427 KRT8P47-201ENST00000604727 1398 ntBASIC18.73■□□□□ 0.59
LRCH4O75427 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH4O75427 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH4O75427 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH4O75427 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.73■□□□□ 0.59
LRCH4O75427 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
LRCH4O75427 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH4O75427 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.73■□□□□ 0.59
LRCH4O75427 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH4O75427 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH4O75427 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH4O75427 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH4O75427 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH4O75427 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH4O75427 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
LRCH4O75427 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH4O75427 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
LRCH4O75427 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.73■□□□□ 0.59
LRCH4O75427 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.73■□□□□ 0.59
LRCH4O75427 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.73■□□□□ 0.59
LRCH4O75427 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH4O75427 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.73■□□□□ 0.59
LRCH4O75427 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH4O75427 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.72■□□□□ 0.59
LRCH4O75427 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.72■□□□□ 0.59
LRCH4O75427 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH4O75427 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH4O75427 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
LRCH4O75427 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH4O75427 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH4O75427 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.72■□□□□ 0.59
LRCH4O75427 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH4O75427 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
LRCH4O75427 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.72■□□□□ 0.59
LRCH4O75427 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH4O75427 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.72■□□□□ 0.59
LRCH4O75427 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH4O75427 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH4O75427 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.72■□□□□ 0.59
LRCH4O75427 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.72■□□□□ 0.59
LRCH4O75427 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.72■□□□□ 0.59
LRCH4O75427 AC009154.2-201ENST00000621177 724 ntBASIC18.72■□□□□ 0.59
LRCH4O75427 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.72■□□□□ 0.59
LRCH4O75427 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH4O75427 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.72■□□□□ 0.59
LRCH4O75427 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH4O75427 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms