Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 AC112698.1-201ENST00000510299 916 ntBASIC18.54■□□□□ 0.56
TSPAN3O60637 AC096582.2-201ENST00000510860 516 ntBASIC18.54■□□□□ 0.56
TSPAN3O60637 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.54■□□□□ 0.56
TSPAN3O60637 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TSPAN3O60637 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.54■□□□□ 0.56
TSPAN3O60637 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TSPAN3O60637 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
TSPAN3O60637 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TSPAN3O60637 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.54■□□□□ 0.56
TSPAN3O60637 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.54■□□□□ 0.56
TSPAN3O60637 AL096828.2-201ENST00000567259 1965 ntBASIC18.53■□□□□ 0.56
TSPAN3O60637 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TSPAN3O60637 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.53■□□□□ 0.56
TSPAN3O60637 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TSPAN3O60637 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.53■□□□□ 0.56
TSPAN3O60637 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TSPAN3O60637 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TSPAN3O60637 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TSPAN3O60637 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.53■□□□□ 0.56
TSPAN3O60637 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TSPAN3O60637 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TSPAN3O60637 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TSPAN3O60637 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TSPAN3O60637 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
TSPAN3O60637 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TSPAN3O60637 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TSPAN3O60637 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.53■□□□□ 0.56
TSPAN3O60637 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.53■□□□□ 0.56
TSPAN3O60637 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.53■□□□□ 0.56
TSPAN3O60637 EMBP1-201ENST00000458200 901 ntBASIC18.53■□□□□ 0.56
TSPAN3O60637 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.53■□□□□ 0.56
TSPAN3O60637 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.53■□□□□ 0.56
TSPAN3O60637 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.53■□□□□ 0.56
TSPAN3O60637 BNIP3P18-201ENST00000593976 575 ntBASIC18.53■□□□□ 0.56
TSPAN3O60637 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.53■□□□□ 0.56
TSPAN3O60637 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TSPAN3O60637 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TSPAN3O60637 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TSPAN3O60637 AC090164.3-201ENST00000610780 2143 ntBASIC18.53■□□□□ 0.56
TSPAN3O60637 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TSPAN3O60637 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.53■□□□□ 0.56
TSPAN3O60637 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.53■□□□□ 0.56
TSPAN3O60637 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TSPAN3O60637 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TSPAN3O60637 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.53■□□□□ 0.56
TSPAN3O60637 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TSPAN3O60637 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TSPAN3O60637 AC093010.1-201ENST00000473625 1624 ntBASIC18.52■□□□□ 0.56
TSPAN3O60637 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.52■□□□□ 0.56
TSPAN3O60637 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.52■□□□□ 0.56
TSPAN3O60637 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TSPAN3O60637 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TSPAN3O60637 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TSPAN3O60637 AC093677.2-201ENST00000600169 1863 ntBASIC18.52■□□□□ 0.56
TSPAN3O60637 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TSPAN3O60637 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TSPAN3O60637 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TSPAN3O60637 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
TSPAN3O60637 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TSPAN3O60637 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TSPAN3O60637 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.52■□□□□ 0.56
TSPAN3O60637 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TSPAN3O60637 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TSPAN3O60637 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TSPAN3O60637 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.52■□□□□ 0.56
TSPAN3O60637 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.52■□□□□ 0.56
TSPAN3O60637 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TSPAN3O60637 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.52■□□□□ 0.56
TSPAN3O60637 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TSPAN3O60637 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.52■□□□□ 0.56
TSPAN3O60637 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TSPAN3O60637 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TSPAN3O60637 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TSPAN3O60637 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
TSPAN3O60637 AC009113.1-201ENST00000570267 2443 ntBASIC18.52■□□□□ 0.55
TSPAN3O60637 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.52■□□□□ 0.55
TSPAN3O60637 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TSPAN3O60637 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
TSPAN3O60637 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.52■□□□□ 0.55
TSPAN3O60637 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.52■□□□□ 0.55
TSPAN3O60637 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TSPAN3O60637 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TSPAN3O60637 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.51■□□□□ 0.55
TSPAN3O60637 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TSPAN3O60637 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TSPAN3O60637 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TSPAN3O60637 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
TSPAN3O60637 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TSPAN3O60637 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
TSPAN3O60637 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.51■□□□□ 0.55
TSPAN3O60637 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.51■□□□□ 0.55
TSPAN3O60637 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.51■□□□□ 0.55
TSPAN3O60637 LINC01711-201ENST00000598340 967 ntBASIC18.51■□□□□ 0.55
TSPAN3O60637 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TSPAN3O60637 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TSPAN3O60637 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TSPAN3O60637 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TSPAN3O60637 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
TSPAN3O60637 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.51■□□□□ 0.55
TSPAN3O60637 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms